Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN20P56880 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN20P56880 AC020656.2-201ENST00000613291 5309 ntBASIC5.21□□□□□ -1.58
CLDN20P56880 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN20P56880 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CLDN20P56880 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN20P56880 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN20P56880 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN20P56880 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CLDN20P56880 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CLDN20P56880 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN20P56880 RNA5SP394-201ENST00000364216 119 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 RN7SKP78-201ENST00000364711 318 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN20P56880 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLDN20P56880 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN20P56880 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 RN7SKP279-201ENST00000411383 298 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 GPS2P1-201ENST00000411761 986 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN20P56880 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN20P56880 SUMO2P3-201ENST00000438311 288 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN20P56880 AC092106.1-201ENST00000444291 373 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 GXYLT1P1-201ENST00000446657 490 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN20P56880 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN20P56880 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN20P56880 RPSAP37-201ENST00000470913 821 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 RPS17P15-201ENST00000475609 349 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 AC108729.2-201ENST00000476543 840 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 AC006539.1-201ENST00000481419 501 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 RPL32P33-201ENST00000487023 394 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 AC009120.1-201ENST00000493458 473 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 EIF3LP3-201ENST00000495197 822 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN20P56880 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN20P56880 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN20P56880 SNORA76.2-201ENST00000517095 137 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 AC103833.1-201ENST00000517442 172 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CLDN20P56880 HMGB1P46-201ENST00000520062 610 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN20P56880 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.2□□□□□ -1.58
CLDN20P56880 AC093510.2-201ENST00000562820 896 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 MIR4260-201ENST00000583107 67 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN20P56880 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN20P56880 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.2□□□□□ -1.58
CLDN20P56880 ZNF92P2-201ENST00000600543 1059 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN20P56880 AC087565.3-203ENST00000641018 837 ntBASIC5.2□□□□□ -1.58
CLDN20P56880 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN20P56880 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN20P56880 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN20P56880 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLDN20P56880 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN20P56880 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CLDN20P56880 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN20P56880 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLDN20P56880 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN20P56880 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN20P56880 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 AC007842.1-201ENST00000597336 2039 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CLDN20P56880 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 MFSD8-239ENST00000641590 2479 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN20P56880 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLDN20P56880 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN20P56880 RANP4-201ENST00000413361 655 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AL121878.1-201ENST00000418638 859 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN20P56880 AC242426.1-201ENST00000435270 960 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AC096775.1-201ENST00000437724 448 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 ELOCP3-201ENST00000439303 348 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AC064862.4-201ENST00000442180 334 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN20P56880 AL161636.2-201ENST00000445179 927 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 HMGN1P36-201ENST00000446623 298 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 EIF2S2P5-201ENST00000457635 968 ntBASIC5.19□□□□□ -1.58
CLDN20P56880 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.19□□□□□ -1.58
CLDN20P56880 AC079080.1-201ENST00000479841 822 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms