Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC090888.2-201ENST00000559765 1144 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SUMO3P55854 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.61□□□□□ -1.51
SUMO3P55854 SMG1P7-201ENST00000565246 2704 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 AC023824.3-201ENST00000569003 562 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 AC022884.3-201ENST00000579571 248 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.61□□□□□ -1.51
SUMO3P55854 MIR4701-201ENST00000583094 63 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.61□□□□□ -1.51
SUMO3P55854 AC020916.2-201ENST00000591242 360 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 AC245036.5-201ENST00000596330 847 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 AL080312.2-201ENST00000613001 630 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 uc_338.31-201ENST00000615595 186 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SUMO3P55854 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SUMO3P55854 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SUMO3P55854 AC109454.4-201ENST00000623411 649 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 OR1S1-201ENST00000624470 978 ntBASIC5.61□□□□□ -1.51
SUMO3P55854 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SUMO3P55854 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.61□□□□□ -1.51
SUMO3P55854 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SUMO3P55854 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.61□□□□□ -1.51
SUMO3P55854 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SUMO3P55854 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.61□□□□□ -1.51
SUMO3P55854 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.6□□□□□ -1.51
SUMO3P55854 NSRP1P1-201ENST00000444067 1693 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.6□□□□□ -1.51
SUMO3P55854 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.6□□□□□ -1.51
SUMO3P55854 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 AC111188.2-201ENST00000529697 1387 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 MFSD8-219ENST00000641228 2559 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SUMO3P55854 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.6□□□□□ -1.51
SUMO3P55854 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.6□□□□□ -1.51
SUMO3P55854 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.6□□□□□ -1.51
SUMO3P55854 KRR1P1-201ENST00000419430 803 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 RPSAP65-201ENST00000429660 595 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.6□□□□□ -1.51
SUMO3P55854 MTCO2P20-201ENST00000437339 673 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 Z77249.1-201ENST00000444622 1175 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 TIMM8BP2-201ENST00000445940 251 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC002553.3-201ENST00000453002 341 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC112187.1-201ENST00000455837 479 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 AC106822.1-201ENST00000502647 526 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.6□□□□□ -1.51
SUMO3P55854 MAST4-IT1-201ENST00000514241 658 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 RNA5SP441-201ENST00000516809 88 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 AC124293.1-201ENST00000530034 493 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 HMGB1P42-201ENST00000532126 553 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.6□□□□□ -1.51
SUMO3P55854 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 AP000619.2-201ENST00000546014 969 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 MTND4P33-201ENST00000556706 766 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.6□□□□□ -1.51
SUMO3P55854 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.6□□□□□ -1.51
SUMO3P55854 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.6□□□□□ -1.51
SUMO3P55854 GAS5-AS1-201ENST00000602767 694 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC141002.1-201ENST00000607025 279 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 VN1R74P-201ENST00000613259 503 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC021755.4-201ENST00000616620 456 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 AC048341.3-201ENST00000619323 491 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SUMO3P55854 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SUMO3P55854 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SUMO3P55854 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 DDX18P4-201ENST00000511690 1966 ntBASIC5.6□□□□□ -1.51
SUMO3P55854 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SUMO3P55854 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.6□□□□□ -1.51
SUMO3P55854 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 MTND4P8-201ENST00000514997 1362 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms