Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH13P55290 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH13P55290 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH13P55290 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH13P55290 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH13P55290 AC016550.3-201ENST00000515706 767 ntBASIC5.38□□□□□ -1.55
CDH13P55290 SNORA70.20-201ENST00000516848 126 ntBASIC5.38□□□□□ -1.55
CDH13P55290 RNA5SP230-201ENST00000517039 122 ntBASIC5.38□□□□□ -1.55
CDH13P55290 RNU6-889P-201ENST00000517189 103 ntBASIC5.38□□□□□ -1.55
CDH13P55290 TRIM77BP-201ENST00000524985 1119 ntBASIC5.38□□□□□ -1.55
CDH13P55290 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH13P55290 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH13P55290 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 MIR4660-201ENST00000583549 74 ntBASIC5.38□□□□□ -1.55
CDH13P55290 AC010487.1-201ENST00000594408 1172 ntBASIC5.38□□□□□ -1.55
CDH13P55290 AC009779.8-202ENST00000607990 932 ntBASIC5.38□□□□□ -1.55
CDH13P55290 AL596275.2-207ENST00000641188 675 ntBASIC5.38□□□□□ -1.55
CDH13P55290 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CDH13P55290 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CDH13P55290 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CDH13P55290 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH13P55290 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDH13P55290 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CDH13P55290 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.38□□□□□ -1.55
CDH13P55290 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 AC024341.1-201ENST00000526444 1552 ntBASIC5.38□□□□□ -1.55
CDH13P55290 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH13P55290 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH13P55290 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 AC100757.1-201ENST00000616872 1835 ntBASIC5.37□□□□□ -1.55
CDH13P55290 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 RNA5SP394-201ENST00000364216 119 ntBASIC5.37□□□□□ -1.55
CDH13P55290 RNA5SP131-201ENST00000365452 119 ntBASIC5.37□□□□□ -1.55
CDH13P55290 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH13P55290 SNORD56.6-201ENST00000384569 71 ntBASIC5.37□□□□□ -1.55
CDH13P55290 HMGB1P20-201ENST00000402555 677 ntBASIC5.37□□□□□ -1.55
CDH13P55290 RNU2-22P-201ENST00000411266 212 ntBASIC5.37□□□□□ -1.55
CDH13P55290 USP9YP19-201ENST00000412165 485 ntBASIC5.37□□□□□ -1.55
CDH13P55290 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH13P55290 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH13P55290 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH13P55290 AC093084.1-201ENST00000424233 687 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH13P55290 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH13P55290 AC017099.1-201ENST00000448261 1028 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH13P55290 AP006222.1-205ENST00000450734 457 ntBASIC5.37□□□□□ -1.55
CDH13P55290 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 LARP7P4-201ENST00000481075 878 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AC090543.1-201ENST00000492168 485 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AC015864.1-201ENST00000496512 544 ntBASIC5.37□□□□□ -1.55
CDH13P55290 RN7SL649P-201ENST00000496974 275 ntBASIC5.37□□□□□ -1.55
CDH13P55290 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH13P55290 AC021193.1-201ENST00000511607 420 ntBASIC5.37□□□□□ -1.55
CDH13P55290 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH13P55290 RNA5SP473-201ENST00000516402 125 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AC060775.1-201ENST00000518241 520 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH13P55290 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH13P55290 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
CDH13P55290 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH13P55290 AP005403.1-201ENST00000579720 229 ntBASIC5.37□□□□□ -1.55
CDH13P55290 FAM106CP-201ENST00000582212 507 ntBASIC5.37□□□□□ -1.55
CDH13P55290 MIR7853-201ENST00000584820 132 ntBASIC5.37□□□□□ -1.55
CDH13P55290 BMS1P7-201ENST00000602440 1052 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AC040174.2-201ENST00000602701 465 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AC108738.1-201ENST00000603703 237 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AC005021.1-201ENST00000608730 355 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AL356094.1-201ENST00000624663 1212 ntBASIC5.37□□□□□ -1.55
CDH13P55290 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH13P55290 AC073869.8-201ENST00000641806 335 ntBASIC5.37□□□□□ -1.55
CDH13P55290 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.37□□□□□ -1.55
CDH13P55290 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH13P55290 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CDH13P55290 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH13P55290 AC092376.2-201ENST00000622621 4116 ntBASIC5.37□□□□□ -1.55
CDH13P55290 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CDH13P55290 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH13P55290 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CDH13P55290 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH13P55290 AL034549.2-201ENST00000618285 3373 ntBASIC5.36□□□□□ -1.55
CDH13P55290 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH13P55290 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms