Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 AL442128.2-201ENST00000620246 1824 ntBASIC5.29□□□□□ -1.56
CDH12P55289 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 AC093225.1-201ENST00000506867 1408 ntBASIC5.29□□□□□ -1.56
CDH12P55289 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH12P55289 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH12P55289 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 AC106754.1-201ENST00000562632 1513 ntBASIC5.28□□□□□ -1.56
CDH12P55289 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH12P55289 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 HSPD1P7-201ENST00000447985 1686 ntBASIC5.28□□□□□ -1.56
CDH12P55289 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH12P55289 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH12P55289 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 AL034546.1-201ENST00000623740 3693 ntBASIC5.28□□□□□ -1.56
CDH12P55289 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH12P55289 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH12P55289 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 U3.23-201ENST00000391132 200 ntBASIC5.28□□□□□ -1.56
CDH12P55289 U3.28-201ENST00000391249 210 ntBASIC5.28□□□□□ -1.56
CDH12P55289 GSTA12P-201ENST00000402398 508 ntBASIC5.28□□□□□ -1.56
CDH12P55289 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH12P55289 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 USP12PY-201ENST00000427677 1064 ntBASIC5.28□□□□□ -1.56
CDH12P55289 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.28□□□□□ -1.56
CDH12P55289 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.28□□□□□ -1.56
CDH12P55289 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH12P55289 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH12P55289 MTND6P5-201ENST00000448266 512 ntBASIC5.28□□□□□ -1.56
CDH12P55289 CFL1P4-201ENST00000451536 498 ntBASIC5.28□□□□□ -1.56
CDH12P55289 AC023194.2-201ENST00000465398 406 ntBASIC5.28□□□□□ -1.56
CDH12P55289 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 PRELID3BP6-201ENST00000503839 571 ntBASIC5.28□□□□□ -1.56
CDH12P55289 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH12P55289 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH12P55289 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH12P55289 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 AP003066.2-201ENST00000529375 555 ntBASIC5.28□□□□□ -1.56
CDH12P55289 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 OR4A43P-201ENST00000532938 908 ntBASIC5.28□□□□□ -1.56
CDH12P55289 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.28□□□□□ -1.56
CDH12P55289 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH12P55289 MTND1P24-201ENST00000552175 861 ntBASIC5.28□□□□□ -1.56
CDH12P55289 AL049838.1-201ENST00000563647 981 ntBASIC5.28□□□□□ -1.56
CDH12P55289 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.28□□□□□ -1.56
CDH12P55289 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 AP001437.1-201ENST00000608783 456 ntBASIC5.28□□□□□ -1.56
CDH12P55289 AP005229.2-201ENST00000609980 697 ntBASIC5.28□□□□□ -1.56
CDH12P55289 AC008759.3-201ENST00000613300 508 ntBASIC5.28□□□□□ -1.56
CDH12P55289 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH12P55289 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH12P55289 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH12P55289 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 AF287957.1-201ENST00000607368 1595 ntBASIC5.28□□□□□ -1.56
CDH12P55289 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH12P55289 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH12P55289 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CDH12P55289 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH12P55289 AC003985.2-201ENST00000562268 1669 ntBASIC5.28□□□□□ -1.56
CDH12P55289 AC093671.1-201ENST00000624981 2929 ntBASIC5.27□□□□□ -1.57
CDH12P55289 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH12P55289 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 AC027088.4-201ENST00000611559 1947 ntBASIC5.27□□□□□ -1.57
CDH12P55289 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CDH12P55289 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH12P55289 AL121886.1-201ENST00000358609 435 ntBASIC5.27□□□□□ -1.57
CDH12P55289 RNA5SP326-201ENST00000363209 110 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH12P55289 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 MIR130A-201ENST00000385274 89 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AC005042.1-201ENST00000393397 800 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AL391422.1-201ENST00000402155 436 ntBASIC5.27□□□□□ -1.57
CDH12P55289 NPM1P37-201ENST00000403105 874 ntBASIC5.27□□□□□ -1.57
CDH12P55289 MIR1275-201ENST00000408770 80 ntBASIC5.27□□□□□ -1.57
CDH12P55289 RN7SKP29-201ENST00000410957 272 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms