Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCNKAP51800 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCNKAP51800 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLCNKAP51800 SMG1P7-201ENST00000565246 2704 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCNKAP51800 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.51□□□□□ -1.53
CLCNKAP51800 RN7SKP17-201ENST00000411242 351 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCNKAP51800 ARAFP1-201ENST00000422172 605 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCNKAP51800 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCNKAP51800 MRPS33P4-201ENST00000434892 317 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 AL596266.1-201ENST00000448132 400 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 MTND2P25-201ENST00000449028 610 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 AL353718.1-201ENST00000451028 517 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC098583.1-201ENST00000480875 255 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.51□□□□□ -1.53
CLCNKAP51800 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCNKAP51800 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 ATP5LP3-201ENST00000514223 304 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 AC117525.1-201ENST00000515228 503 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 IGLV3-24-201ENST00000517477 197 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCNKAP51800 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCNKAP51800 MRPS21P7-201ENST00000566937 238 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC026790.2-201ENST00000606282 430 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 AC109309.2-201ENST00000612597 332 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 AC074140.1-201ENST00000621617 208 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCNKAP51800 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLCNKAP51800 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC099654.6-201ENST00000636487 512 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 BCORP1-203ENST00000513194 5093 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCNKAP51800 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 AC009962.1-201ENST00000567327 3813 ntBASIC5.51□□□□□ -1.53
CLCNKAP51800 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCNKAP51800 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCNKAP51800 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 KYNUP3-201ENST00000574386 1341 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 SNORA51.1-201ENST00000363243 140 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 RNU6-1331P-201ENST00000363658 106 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 RN7SKP160-201ENST00000363804 340 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 RNU4-2-201ENST00000365668 141 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 RNU6-729P-201ENST00000384399 107 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLCNKAP51800 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCNKAP51800 AC017019.1-201ENST00000426129 261 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 VTI1BP4-201ENST00000427516 527 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCNKAP51800 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCNKAP51800 EIF1P7-201ENST00000487533 337 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 NPM1P28-201ENST00000492269 840 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 MTND3P24-201ENST00000506306 329 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms