Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX2P48431 OR11I1P-201ENST00000486033 954 ntBASIC5.2□□□□□ -1.58
SOX2P48431 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX2P48431 RPS12P31-201ENST00000491419 398 ntBASIC5.2□□□□□ -1.58
SOX2P48431 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX2P48431 AC134050.1-201ENST00000495088 933 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.2□□□□□ -1.58
SOX2P48431 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.2□□□□□ -1.58
SOX2P48431 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX2P48431 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX2P48431 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.2□□□□□ -1.58
SOX2P48431 RN7SKP34-201ENST00000516142 244 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.2□□□□□ -1.58
SOX2P48431 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
SOX2P48431 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.2□□□□□ -1.58
SOX2P48431 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.2□□□□□ -1.58
SOX2P48431 AC023824.3-201ENST00000569003 562 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AC090826.1-203ENST00000569235 490 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.2□□□□□ -1.58
SOX2P48431 RN7SL657P-201ENST00000582431 293 ntBASIC5.2□□□□□ -1.58
SOX2P48431 RN7SL622P-201ENST00000585292 275 ntBASIC5.2□□□□□ -1.58
SOX2P48431 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX2P48431 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX2P48431 AP001823.1-201ENST00000604056 1003 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AC079610.2-201ENST00000604818 690 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AL133481.2-203ENST00000607558 139 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX2P48431 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AC021755.4-201ENST00000616620 456 ntBASIC5.2□□□□□ -1.58
SOX2P48431 AC022079.1-201ENST00000621546 602 ntBASIC5.2□□□□□ -1.58
SOX2P48431 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX2P48431 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX2P48431 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SOX2P48431 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX2P48431 ZNF849P-201ENST00000594711 1566 ntBASIC5.2□□□□□ -1.58
SOX2P48431 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
SOX2P48431 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SOX2P48431 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SOX2P48431 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.19□□□□□ -1.58
SOX2P48431 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SOX2P48431 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 DDX18P6-201ENST00000450119 1997 ntBASIC5.19□□□□□ -1.58
SOX2P48431 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SOX2P48431 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SOX2P48431 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SOX2P48431 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SOX2P48431 RNU4-40P-201ENST00000364351 143 ntBASIC5.19□□□□□ -1.58
SOX2P48431 RNU4-28P-201ENST00000364739 141 ntBASIC5.19□□□□□ -1.58
SOX2P48431 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.19□□□□□ -1.58
SOX2P48431 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 SNORD94-201ENST00000386037 137 ntBASIC5.19□□□□□ -1.58
SOX2P48431 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SOX2P48431 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.19□□□□□ -1.58
SOX2P48431 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX2P48431 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 ETF1P3-201ENST00000430422 1160 ntBASIC5.19□□□□□ -1.58
SOX2P48431 AC093716.1-201ENST00000435923 377 ntBASIC5.19□□□□□ -1.58
SOX2P48431 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 FRG2FP-204ENST00000453982 852 ntBASIC5.19□□□□□ -1.58
SOX2P48431 RPL36AP55-201ENST00000454114 305 ntBASIC5.19□□□□□ -1.58
SOX2P48431 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.19□□□□□ -1.58
SOX2P48431 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.19□□□□□ -1.58
SOX2P48431 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.19□□□□□ -1.58
SOX2P48431 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX2P48431 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.19□□□□□ -1.58
SOX2P48431 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.19□□□□□ -1.58
SOX2P48431 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.19□□□□□ -1.58
SOX2P48431 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SOX2P48431 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SOX2P48431 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.19□□□□□ -1.58
SOX2P48431 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.19□□□□□ -1.58
SOX2P48431 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX2P48431 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.19□□□□□ -1.58
SOX2P48431 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX2P48431 BNIP3P24-201ENST00000593398 557 ntBASIC5.19□□□□□ -1.58
SOX2P48431 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 AL513327.3-201ENST00000602618 469 ntBASIC5.19□□□□□ -1.58
SOX2P48431 AC008536.1-201ENST00000602872 669 ntBASIC5.19□□□□□ -1.58
SOX2P48431 AP002906.1-201ENST00000603405 233 ntBASIC5.19□□□□□ -1.58
SOX2P48431 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX2P48431 AC012557.1-201ENST00000607115 611 ntBASIC5.19□□□□□ -1.58
SOX2P48431 AC231759.1-201ENST00000616455 597 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms