Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 AL354854.1-201ENST00000455940 1363 ntBASIC4.77□□□□□ -1.65
CDX1P47902 TTC39DP-201ENST00000416781 1688 ntBASIC4.77□□□□□ -1.65
CDX1P47902 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDX1P47902 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDX1P47902 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDX1P47902 AL132875.1-201ENST00000403623 949 ntBASIC4.76□□□□□ -1.65
CDX1P47902 RN7SKP222-201ENST00000410651 315 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.76□□□□□ -1.65
CDX1P47902 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.76□□□□□ -1.65
CDX1P47902 ARL2BPP3-201ENST00000421226 480 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AL121882.1-201ENST00000422893 417 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDX1P47902 AL731534.1-201ENST00000434711 269 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AC023141.3-201ENST00000436698 278 ntBASIC4.76□□□□□ -1.65
CDX1P47902 EIF5AP4-201ENST00000441206 465 ntBASIC4.76□□□□□ -1.65
CDX1P47902 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.76□□□□□ -1.65
CDX1P47902 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.76□□□□□ -1.65
CDX1P47902 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.76□□□□□ -1.65
CDX1P47902 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 AC094085.1-201ENST00000468914 584 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.76□□□□□ -1.65
CDX1P47902 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.76□□□□□ -1.65
CDX1P47902 AC008628.1-201ENST00000508663 265 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.76□□□□□ -1.65
CDX1P47902 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 SNORA26.10-201ENST00000516427 141 ntBASIC4.76□□□□□ -1.65
CDX1P47902 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.76□□□□□ -1.65
CDX1P47902 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 AC092865.1-201ENST00000544395 1023 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.76□□□□□ -1.65
CDX1P47902 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.76□□□□□ -1.65
CDX1P47902 AL136520.1-202ENST00000555494 763 ntBASIC4.76□□□□□ -1.65
CDX1P47902 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.76□□□□□ -1.65
CDX1P47902 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.76□□□□□ -1.65
CDX1P47902 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.76□□□□□ -1.65
CDX1P47902 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.76□□□□□ -1.65
CDX1P47902 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.76□□□□□ -1.65
CDX1P47902 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.76□□□□□ -1.65
CDX1P47902 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.76□□□□□ -1.65
CDX1P47902 SS18L2P2-201ENST00000583960 235 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDX1P47902 AC068768.2-201ENST00000602352 343 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AC007423.1-201ENST00000605009 627 ntBASIC4.76□□□□□ -1.65
CDX1P47902 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.76□□□□□ -1.65
CDX1P47902 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.76□□□□□ -1.65
CDX1P47902 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CDX1P47902 AP006248.3-201ENST00000623580 594 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AC090617.9-201ENST00000623751 147 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AC011755.1-201ENST00000623763 2049 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AC093775.1-201ENST00000624154 1868 ntBASIC4.76□□□□□ -1.65
CDX1P47902 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.76□□□□□ -1.65
CDX1P47902 AC073488.3-201ENST00000631611 778 ntBASIC4.76□□□□□ -1.65
CDX1P47902 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDX1P47902 AC018717.1-201ENST00000457712 1505 ntBASIC4.76□□□□□ -1.65
CDX1P47902 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDX1P47902 AC097461.1-201ENST00000568928 2821 ntBASIC4.76□□□□□ -1.65
CDX1P47902 RBMY1HP-201ENST00000382759 1389 ntBASIC4.76□□□□□ -1.65
CDX1P47902 AL353796.1-201ENST00000561542 3241 ntBASIC4.76□□□□□ -1.65
CDX1P47902 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.76□□□□□ -1.65
CDX1P47902 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDX1P47902 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CDX1P47902 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CDX1P47902 MFSD8-219ENST00000641228 2559 ntBASIC4.75□□□□□ -1.65
CDX1P47902 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CDX1P47902 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.75□□□□□ -1.65
CDX1P47902 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CDX1P47902 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 AC023490.2-201ENST00000359859 470 ntBASIC4.75□□□□□ -1.65
CDX1P47902 RN7SKP128-201ENST00000364270 303 ntBASIC4.75□□□□□ -1.65
CDX1P47902 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDX1P47902 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDX1P47902 MIR130B-202ENST00000385018 82 ntBASIC4.75□□□□□ -1.65
CDX1P47902 SNORA40.4-201ENST00000390971 128 ntBASIC4.75□□□□□ -1.65
CDX1P47902 TAF9BP2-201ENST00000400856 499 ntBASIC4.75□□□□□ -1.65
CDX1P47902 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.75□□□□□ -1.65
CDX1P47902 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms