Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC079097.1-201ENST00000512187 1399 ntBASIC5.49□□□□□ -1.53
HTTP42858 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 U3.10-201ENST00000364459 214 ntBASIC5.49□□□□□ -1.53
HTTP42858 RNA5SP345-201ENST00000410646 108 ntBASIC5.49□□□□□ -1.53
HTTP42858 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.49□□□□□ -1.53
HTTP42858 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.49□□□□□ -1.53
HTTP42858 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.49□□□□□ -1.53
HTTP42858 SNORA31.9-201ENST00000516429 84 ntBASIC5.49□□□□□ -1.53
HTTP42858 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.49□□□□□ -1.53
HTTP42858 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.49□□□□□ -1.53
HTTP42858 OR9K1P-202ENST00000641111 3217 ntBASIC5.49□□□□□ -1.53
HTTP42858 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 CASC19-284ENST00000642142 1868 ntBASIC5.48□□□□□ -1.53
HTTP42858 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC5.48□□□□□ -1.53
HTTP42858 AL357515.1-201ENST00000402967 542 ntBASIC5.48□□□□□ -1.53
HTTP42858 RPS17P17-201ENST00000419392 409 ntBASIC5.48□□□□□ -1.53
HTTP42858 AL358176.3-201ENST00000420757 454 ntBASIC5.48□□□□□ -1.53
HTTP42858 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.48□□□□□ -1.53
HTTP42858 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.48□□□□□ -1.53
HTTP42858 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.48□□□□□ -1.53
HTTP42858 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.48□□□□□ -1.53
HTTP42858 AL121932.1-201ENST00000605542 214 ntBASIC5.48□□□□□ -1.53
HTTP42858 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
HTTP42858 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.48□□□□□ -1.53
HTTP42858 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HTTP42858 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HTTP42858 BRD7P6-201ENST00000431406 1860 ntBASIC5.48□□□□□ -1.53
HTTP42858 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HTTP42858 UGT2B26P-201ENST00000508672 1613 ntBASIC5.48□□□□□ -1.53
HTTP42858 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
HTTP42858 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HTTP42858 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HTTP42858 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HTTP42858 AC008280.1-201ENST00000418851 412 ntBASIC5.48□□□□□ -1.53
HTTP42858 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.48□□□□□ -1.53
HTTP42858 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.48□□□□□ -1.53
HTTP42858 RN7SL303P-201ENST00000469773 251 ntBASIC5.48□□□□□ -1.53
HTTP42858 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.48□□□□□ -1.53
HTTP42858 snoU109.5-201ENST00000516231 132 ntBASIC5.48□□□□□ -1.53
HTTP42858 SEPT10P1-201ENST00000517342 1162 ntBASIC5.48□□□□□ -1.53
HTTP42858 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.48□□□□□ -1.53
HTTP42858 AC011477.5-201ENST00000586571 259 ntBASIC5.48□□□□□ -1.53
HTTP42858 BNIP3P35-201ENST00000604530 490 ntBASIC5.48□□□□□ -1.53
HTTP42858 AL356608.1-201ENST00000610034 820 ntBASIC5.48□□□□□ -1.53
HTTP42858 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.48□□□□□ -1.53
HTTP42858 AC025031.4-201ENST00000621248 3271 ntBASIC5.48□□□□□ -1.53
HTTP42858 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
HTTP42858 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.48□□□□□ -1.53
HTTP42858 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
HTTP42858 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HTTP42858 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HTTP42858 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HTTP42858 AL607077.1-201ENST00000401718 499 ntBASIC5.48□□□□□ -1.53
HTTP42858 AC041039.1-201ENST00000485656 536 ntBASIC5.48□□□□□ -1.53
HTTP42858 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.48□□□□□ -1.53
HTTP42858 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.48□□□□□ -1.53
HTTP42858 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HTTP42858 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
HTTP42858 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HTTP42858 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HTTP42858 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.47□□□□□ -1.53
HTTP42858 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.47□□□□□ -1.53
HTTP42858 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.47□□□□□ -1.53
HTTP42858 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HTTP42858 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
HTTP42858 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HTTP42858 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC5.47□□□□□ -1.53
HTTP42858 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.47□□□□□ -1.53
HTTP42858 AL162591.2-201ENST00000449634 317 ntBASIC5.47□□□□□ -1.53
HTTP42858 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.47□□□□□ -1.53
HTTP42858 AC025884.1-201ENST00000556034 378 ntBASIC5.47□□□□□ -1.53
HTTP42858 AL049839.1-201ENST00000556151 657 ntBASIC5.47□□□□□ -1.53
HTTP42858 AL161756.2-201ENST00000604597 246 ntBASIC5.47□□□□□ -1.53
HTTP42858 AC100847.1-201ENST00000611316 481 ntBASIC5.47□□□□□ -1.53
HTTP42858 AL049536.1-201ENST00000625043 744 ntBASIC5.47□□□□□ -1.53
HTTP42858 MIR492-201ENST00000638676 116 ntBASIC5.47□□□□□ -1.53
HTTP42858 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.47□□□□□ -1.53
HTTP42858 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
HTTP42858 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.47□□□□□ -1.53
HTTP42858 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HTTP42858 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HTTP42858 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HTTP42858 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms