Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC084754.1-201ENST00000463466 464 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 NPM1P29-201ENST00000483112 803 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 OR11I1P-201ENST00000486033 954 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 SUMO1P1-201ENST00000497904 306 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 MTATP6P9-201ENST00000515039 680 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 CYCSP22-201ENST00000517555 339 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC136777.2-201ENST00000522979 358 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC004923.2-201ENST00000529649 369 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC068339.2-201ENST00000534395 618 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 DPPA2P4-201ENST00000563717 878 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 H3F3BP2-201ENST00000583907 357 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC025857.2-201ENST00000602711 238 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC100767.2-201ENST00000604840 693 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC026790.2-201ENST00000606282 430 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC018926.1-201ENST00000616335 435 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AL138955.1-201ENST00000622881 1040 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 MIR193BHG-214ENST00000641765 509 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.12□□□□□ -1.59
APOBEC1P41238 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
APOBEC1P41238 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOBEC1P41238 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOBEC1P41238 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AC004076.2-201ENST00000620532 3323 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 HSPD1P7-201ENST00000447985 1686 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
APOBEC1P41238 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
APOBEC1P41238 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AC015689.2-201ENST00000528172 1738 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 OR13C1P-202ENST00000641378 2919 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 PWAR1-201ENST00000624188 2414 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 SNORA64.1-201ENST00000362600 132 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AC005042.1-201ENST00000393397 800 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AL391422.1-201ENST00000402155 436 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AC096921.1-201ENST00000411661 375 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 RPL26P37-201ENST00000411983 438 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 OR2AT2P-201ENST00000413438 905 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 RPS26P13-201ENST00000419030 330 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AC113412.1-201ENST00000425840 504 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 PRUNEP1-201ENST00000425846 705 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 BX119321.1-201ENST00000428912 797 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 KCTD9P1-201ENST00000430462 1167 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 MTCYBP29-201ENST00000436327 1006 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 NANOGP9-201ENST00000439890 892 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AC005297.1-201ENST00000444765 862 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.11□□□□□ -1.59
APOBEC1P41238 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
APOBEC1P41238 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.11□□□□□ -1.59
APOBEC1P41238 LDHBP2-201ENST00000456969 1005 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 RPS23P6-201ENST00000466136 431 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.11□□□□□ -1.59
APOBEC1P41238 RN7SL284P-201ENST00000498823 275 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 SUMO2P4-201ENST00000504193 276 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.11□□□□□ -1.59
APOBEC1P41238 DUTP7-201ENST00000507982 486 ntBASIC5.11□□□□□ -1.59
APOBEC1P41238 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms