Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
FDFT1P37268 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
FDFT1P37268 AL929601.4-201ENST00000613011 1341 ntBASIC5.42□□□□□ -1.54
FDFT1P37268 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
FDFT1P37268 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
FDFT1P37268 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.42□□□□□ -1.54
FDFT1P37268 RNF19BPY-201ENST00000458209 1550 ntBASIC5.42□□□□□ -1.54
FDFT1P37268 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
FDFT1P37268 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 AC104623.2-202ENST00000623477 4002 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.41□□□□□ -1.54
FDFT1P37268 RPL21P67-201ENST00000402896 478 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.41□□□□□ -1.54
FDFT1P37268 AC010740.1-201ENST00000417035 684 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.41□□□□□ -1.54
FDFT1P37268 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 GAPDHP58-201ENST00000438477 1006 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.41□□□□□ -1.54
FDFT1P37268 RPS11P7-201ENST00000442125 465 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.41□□□□□ -1.54
FDFT1P37268 AC073909.1-201ENST00000447112 999 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 NOP56P2-201ENST00000447491 769 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.41□□□□□ -1.54
FDFT1P37268 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.41□□□□□ -1.54
FDFT1P37268 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.41□□□□□ -1.54
FDFT1P37268 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.41□□□□□ -1.54
FDFT1P37268 RPL7P40-201ENST00000481703 745 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AC091544.1-201ENST00000484702 348 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.41□□□□□ -1.54
FDFT1P37268 USP9YP2-201ENST00000504503 1000 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 USP9YP1-201ENST00000513521 1002 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 RNU6-513P-201ENST00000516104 104 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.41□□□□□ -1.54
FDFT1P37268 AC068993.1-201ENST00000546724 589 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AC135626.1-201ENST00000556983 435 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.41□□□□□ -1.54
FDFT1P37268 AC010547.7-201ENST00000570323 333 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AL162431.4-201ENST00000604674 411 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AC011626.1-201ENST00000604710 562 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.41□□□□□ -1.54
FDFT1P37268 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.41□□□□□ -1.54
FDFT1P37268 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.41□□□□□ -1.54
FDFT1P37268 SAMMSON-227ENST00000642114 1199 ntBASIC5.41□□□□□ -1.54
FDFT1P37268 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.41□□□□□ -1.54
FDFT1P37268 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
FDFT1P37268 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
FDFT1P37268 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
FDFT1P37268 CDC27P2-201ENST00000425026 1922 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FDFT1P37268 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
FDFT1P37268 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.4□□□□□ -1.54
FDFT1P37268 SMG1P7-201ENST00000565246 2704 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
FDFT1P37268 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
FDFT1P37268 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
FDFT1P37268 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
FDFT1P37268 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.4□□□□□ -1.54
FDFT1P37268 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FDFT1P37268 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
FDFT1P37268 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
FDFT1P37268 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
FDFT1P37268 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FDFT1P37268 MIR589-201ENST00000385238 99 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.4□□□□□ -1.54
FDFT1P37268 CTSL3P-202ENST00000412179 788 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.4□□□□□ -1.54
FDFT1P37268 GABARAPL3-201ENST00000412799 354 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.4□□□□□ -1.54
FDFT1P37268 NAP1L4P2-201ENST00000425958 899 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 DSTNP5-201ENST00000427921 523 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.4□□□□□ -1.54
FDFT1P37268 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.4□□□□□ -1.54
FDFT1P37268 AL390119.1-201ENST00000440329 312 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 SERPINA7P1-201ENST00000443077 631 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 HMGN1P36-201ENST00000446623 298 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.4□□□□□ -1.54
FDFT1P37268 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FDFT1P37268 ASNSP4-201ENST00000511103 447 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.4□□□□□ -1.54
FDFT1P37268 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.4□□□□□ -1.54
FDFT1P37268 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.4□□□□□ -1.54
FDFT1P37268 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.4□□□□□ -1.54
FDFT1P37268 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.4□□□□□ -1.54
FDFT1P37268 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.4□□□□□ -1.54
FDFT1P37268 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.4□□□□□ -1.54
FDFT1P37268 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.4□□□□□ -1.54
FDFT1P37268 NDUFA5P11-201ENST00000567995 343 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 AC022884.2-201ENST00000578535 580 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 AC127024.5-201ENST00000580085 462 ntBASIC5.4□□□□□ -1.54
FDFT1P37268 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.4□□□□□ -1.54
FDFT1P37268 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms