Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC096921.1-201ENST00000411661 375 ntBASIC5.23□□□□□ -1.57
RORAP35398 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.23□□□□□ -1.57
RORAP35398 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.23□□□□□ -1.57
RORAP35398 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.23□□□□□ -1.57
RORAP35398 SNORD125-201ENST00000459538 96 ntBASIC5.23□□□□□ -1.57
RORAP35398 RPS4XP1-201ENST00000482189 787 ntBASIC5.23□□□□□ -1.57
RORAP35398 RPS21P4-201ENST00000487122 248 ntBASIC5.23□□□□□ -1.57
RORAP35398 AC093763.2-201ENST00000505334 1223 ntBASIC5.23□□□□□ -1.57
RORAP35398 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.23□□□□□ -1.57
RORAP35398 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.23□□□□□ -1.57
RORAP35398 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.23□□□□□ -1.57
RORAP35398 GAPDHP62-201ENST00000515313 990 ntBASIC5.23□□□□□ -1.57
RORAP35398 RNA5SP92-201ENST00000516437 110 ntBASIC5.23□□□□□ -1.57
RORAP35398 RN7SKP99-201ENST00000517028 307 ntBASIC5.23□□□□□ -1.57
RORAP35398 CDC42P3-201ENST00000518493 633 ntBASIC5.23□□□□□ -1.57
RORAP35398 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.23□□□□□ -1.57
RORAP35398 KCTD9P6-201ENST00000522306 950 ntBASIC5.23□□□□□ -1.57
RORAP35398 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.23□□□□□ -1.57
RORAP35398 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.23□□□□□ -1.57
RORAP35398 BLZF2P-201ENST00000553776 1130 ntBASIC5.23□□□□□ -1.57
RORAP35398 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.23□□□□□ -1.57
RORAP35398 AC010547.7-201ENST00000570323 333 ntBASIC5.23□□□□□ -1.57
RORAP35398 AL353729.2-201ENST00000605859 1249 ntBASIC5.23□□□□□ -1.57
RORAP35398 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.23□□□□□ -1.57
RORAP35398 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.23□□□□□ -1.57
RORAP35398 AC019072.1-201ENST00000604535 1551 ntBASIC5.23□□□□□ -1.57
RORAP35398 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RORAP35398 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RORAP35398 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.22□□□□□ -1.57
RORAP35398 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
RORAP35398 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.22□□□□□ -1.57
RORAP35398 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.22□□□□□ -1.57
RORAP35398 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.22□□□□□ -1.57
RORAP35398 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.22□□□□□ -1.57
RORAP35398 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.22□□□□□ -1.57
RORAP35398 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.22□□□□□ -1.57
RORAP35398 HSPD1P7-201ENST00000447985 1686 ntBASIC5.22□□□□□ -1.57
RORAP35398 MT-RNR2-201ENST00000387347 1559 ntBASIC5.22□□□□□ -1.57
RORAP35398 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RORAP35398 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RORAP35398 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.22□□□□□ -1.57
RORAP35398 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RORAP35398 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RORAP35398 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.22□□□□□ -1.57
RORAP35398 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RORAP35398 AC016769.2-201ENST00000414815 475 ntBASIC5.22□□□□□ -1.57
RORAP35398 PTP4A1P1-201ENST00000420539 515 ntBASIC5.22□□□□□ -1.57
RORAP35398 AL136231.1-201ENST00000429407 730 ntBASIC5.22□□□□□ -1.57
RORAP35398 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.22□□□□□ -1.57
RORAP35398 AC105399.1-202ENST00000447303 205 ntBASIC5.22□□□□□ -1.57
RORAP35398 RN7SL172P-201ENST00000460535 303 ntBASIC5.22□□□□□ -1.57
RORAP35398 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.22□□□□□ -1.57
RORAP35398 RN7SL447P-201ENST00000494711 245 ntBASIC5.22□□□□□ -1.57
RORAP35398 RPS17P5-201ENST00000498293 408 ntBASIC5.22□□□□□ -1.57
RORAP35398 RPEP1-201ENST00000504507 658 ntBASIC5.22□□□□□ -1.57
RORAP35398 HIGD1AP14-201ENST00000507617 282 ntBASIC5.22□□□□□ -1.57
RORAP35398 GLUD1P3-202ENST00000508551 200 ntBASIC5.22□□□□□ -1.57
RORAP35398 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.22□□□□□ -1.57
RORAP35398 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.22□□□□□ -1.57
RORAP35398 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.22□□□□□ -1.57
RORAP35398 AL359219.2-201ENST00000555184 348 ntBASIC5.22□□□□□ -1.57
RORAP35398 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.22□□□□□ -1.57
RORAP35398 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
RORAP35398 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.22□□□□□ -1.57
RORAP35398 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.22□□□□□ -1.57
RORAP35398 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.22□□□□□ -1.57
RORAP35398 AP002884.5-201ENST00000595053 1132 ntBASIC5.22□□□□□ -1.57
RORAP35398 AC211433.2-201ENST00000608433 387 ntBASIC5.22□□□□□ -1.57
RORAP35398 WBP1LP8-201ENST00000617401 327 ntBASIC5.22□□□□□ -1.57
RORAP35398 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.22□□□□□ -1.57
RORAP35398 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.22□□□□□ -1.57
RORAP35398 SAMMSON-227ENST00000642114 1199 ntBASIC5.22□□□□□ -1.57
RORAP35398 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RORAP35398 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RORAP35398 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RORAP35398 OR4F13P-202ENST00000560066 2054 ntBASIC5.22□□□□□ -1.57
RORAP35398 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RORAP35398 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
RORAP35398 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.57
RORAP35398 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RORAP35398 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RORAP35398 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RORAP35398 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.21□□□□□ -1.58
RORAP35398 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RORAP35398 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
RORAP35398 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RORAP35398 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RORAP35398 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RORAP35398 MIR133B-201ENST00000362210 119 ntBASIC5.21□□□□□ -1.58
RORAP35398 RNA5SP326-201ENST00000363209 110 ntBASIC5.21□□□□□ -1.58
RORAP35398 U3.10-201ENST00000364459 214 ntBASIC5.21□□□□□ -1.58
RORAP35398 MIR223-201ENST00000385204 110 ntBASIC5.21□□□□□ -1.58
RORAP35398 RNA5SP339-201ENST00000390987 122 ntBASIC5.21□□□□□ -1.58
RORAP35398 AL133325.1-201ENST00000421090 382 ntBASIC5.21□□□□□ -1.58
RORAP35398 AL139148.1-201ENST00000427122 680 ntBASIC5.21□□□□□ -1.58
RORAP35398 NANOGP4-201ENST00000427230 913 ntBASIC5.21□□□□□ -1.58
RORAP35398 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.21□□□□□ -1.58
RORAP35398 NPM1P18-201ENST00000434232 732 ntBASIC5.21□□□□□ -1.58
RORAP35398 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.21□□□□□ -1.58
RORAP35398 AC005532.2-201ENST00000467154 373 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms