Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.31□□□□□ -1.56
RPA3P35244 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.31□□□□□ -1.56
RPA3P35244 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.31□□□□□ -1.56
RPA3P35244 AC108161.1-201ENST00000461060 402 ntBASIC5.31□□□□□ -1.56
RPA3P35244 AL136038.1-201ENST00000497246 351 ntBASIC5.31□□□□□ -1.56
RPA3P35244 AC026782.2-201ENST00000510845 636 ntBASIC5.31□□□□□ -1.56
RPA3P35244 MTND6P2-201ENST00000512226 524 ntBASIC5.31□□□□□ -1.56
RPA3P35244 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.31□□□□□ -1.56
RPA3P35244 SCARNA16.4-201ENST00000516956 187 ntBASIC5.31□□□□□ -1.56
RPA3P35244 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.31□□□□□ -1.56
RPA3P35244 MIR4472-2-201ENST00000582069 67 ntBASIC5.31□□□□□ -1.56
RPA3P35244 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.31□□□□□ -1.56
RPA3P35244 AL589674.2-201ENST00000604304 337 ntBASIC5.31□□□□□ -1.56
RPA3P35244 AC011626.1-201ENST00000604710 562 ntBASIC5.31□□□□□ -1.56
RPA3P35244 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPA3P35244 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.31□□□□□ -1.56
RPA3P35244 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPA3P35244 AL449283.1-201ENST00000602631 3403 ntBASIC5.31□□□□□ -1.56
RPA3P35244 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPA3P35244 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.31□□□□□ -1.56
RPA3P35244 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPA3P35244 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPA3P35244 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
RPA3P35244 AL022393.1-201ENST00000625142 1677 ntBASIC5.31□□□□□ -1.56
RPA3P35244 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RPA3P35244 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPA3P35244 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
RPA3P35244 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.3□□□□□ -1.56
RPA3P35244 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.3□□□□□ -1.56
RPA3P35244 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.3□□□□□ -1.56
RPA3P35244 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPA3P35244 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RPA3P35244 MARK2P12-201ENST00000420129 585 ntBASIC5.3□□□□□ -1.56
RPA3P35244 NANOGP4-201ENST00000427230 913 ntBASIC5.3□□□□□ -1.56
RPA3P35244 RPL12P17-201ENST00000432393 498 ntBASIC5.3□□□□□ -1.56
RPA3P35244 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.3□□□□□ -1.56
RPA3P35244 AC012075.1-201ENST00000436549 580 ntBASIC5.3□□□□□ -1.56
RPA3P35244 AC100832.1-201ENST00000471945 383 ntBASIC5.3□□□□□ -1.56
RPA3P35244 AC090638.1-201ENST00000498296 909 ntBASIC5.3□□□□□ -1.56
RPA3P35244 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.3□□□□□ -1.56
RPA3P35244 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.3□□□□□ -1.56
RPA3P35244 GTF2IP11-201ENST00000526931 420 ntBASIC5.3□□□□□ -1.56
RPA3P35244 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.3□□□□□ -1.56
RPA3P35244 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RPA3P35244 AC078878.1-201ENST00000539832 958 ntBASIC5.3□□□□□ -1.56
RPA3P35244 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.3□□□□□ -1.56
RPA3P35244 AC127381.1-201ENST00000555979 939 ntBASIC5.3□□□□□ -1.56
RPA3P35244 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.3□□□□□ -1.56
RPA3P35244 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.3□□□□□ -1.56
RPA3P35244 AC011445.2-201ENST00000599274 173 ntBASIC5.3□□□□□ -1.56
RPA3P35244 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.3□□□□□ -1.56
RPA3P35244 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.3□□□□□ -1.56
RPA3P35244 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPA3P35244 AL157762.1-201ENST00000619612 415 ntBASIC5.3□□□□□ -1.56
RPA3P35244 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.3□□□□□ -1.56
RPA3P35244 AL049767.1-202ENST00000637826 242 ntBASIC5.3□□□□□ -1.56
RPA3P35244 MIR4302-201ENST00000638058 60 ntBASIC5.3□□□□□ -1.56
RPA3P35244 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPA3P35244 AC120036.2-201ENST00000509729 1474 ntBASIC5.3□□□□□ -1.56
RPA3P35244 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RPA3P35244 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.3□□□□□ -1.56
RPA3P35244 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPA3P35244 NR1H5P-201ENST00000452683 1377 ntBASIC5.29□□□□□ -1.56
RPA3P35244 AC023421.1-201ENST00000590535 1785 ntBASIC5.29□□□□□ -1.56
RPA3P35244 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RPA3P35244 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.29□□□□□ -1.56
RPA3P35244 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.29□□□□□ -1.56
RPA3P35244 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPA3P35244 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPA3P35244 AC017079.1-201ENST00000333650 415 ntBASIC5.29□□□□□ -1.56
RPA3P35244 RN7SKP153-201ENST00000365026 316 ntBASIC5.29□□□□□ -1.56
RPA3P35244 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.29□□□□□ -1.56
RPA3P35244 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPA3P35244 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.29□□□□□ -1.56
RPA3P35244 MIR589-201ENST00000385238 99 ntBASIC5.29□□□□□ -1.56
RPA3P35244 MIR143-201ENST00000385300 106 ntBASIC5.29□□□□□ -1.56
RPA3P35244 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.29□□□□□ -1.56
RPA3P35244 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.29□□□□□ -1.56
RPA3P35244 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.29□□□□□ -1.56
RPA3P35244 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.29□□□□□ -1.56
RPA3P35244 RANP1-206ENST00000455094 651 ntBASIC5.29□□□□□ -1.56
RPA3P35244 AC058823.1-201ENST00000485315 474 ntBASIC5.29□□□□□ -1.56
RPA3P35244 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.29□□□□□ -1.56
RPA3P35244 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.29□□□□□ -1.56
RPA3P35244 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.29□□□□□ -1.56
RPA3P35244 AP004607.2-201ENST00000533949 322 ntBASIC5.29□□□□□ -1.56
RPA3P35244 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPA3P35244 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPA3P35244 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.29□□□□□ -1.56
RPA3P35244 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.29□□□□□ -1.56
RPA3P35244 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.29□□□□□ -1.56
RPA3P35244 AC010245.2-201ENST00000606908 1167 ntBASIC5.29□□□□□ -1.56
RPA3P35244 MIR8080-201ENST00000622224 89 ntBASIC5.29□□□□□ -1.56
RPA3P35244 AP000648.2-201ENST00000624182 404 ntBASIC5.29□□□□□ -1.56
RPA3P35244 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPA3P35244 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPA3P35244 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPA3P35244 TET1P1-201ENST00000426627 2301 ntBASIC5.29□□□□□ -1.56
RPA3P35244 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.29□□□□□ -1.56
RPA3P35244 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 265.2 ms