Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC004076.2-201ENST00000620532 3323 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 AC092451.3-201ENST00000625067 1343 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA9P31269 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA9P31269 RN7SKP115-201ENST00000363177 317 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 MIR105-1-201ENST00000385222 81 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA9P31269 HSPA8P15-201ENST00000401676 786 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 Y_RNA.625-201ENST00000411256 107 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 DDX39BP1-205ENST00000422507 192 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 PA2G4P6-201ENST00000438325 1197 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 AC079168.1-201ENST00000458741 345 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 PSAT1P4-201ENST00000466500 526 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 AC097484.1-201ENST00000471148 389 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA9P31269 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA9P31269 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.59□□□□□ -1.51
HOXA9P31269 AC021106.1-201ENST00000509020 1058 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 AC004980.4-201ENST00000513375 203 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 AC110775.1-201ENST00000513721 462 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 AC092593.2-201ENST00000513866 913 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 OR5AZ1P-201ENST00000527448 943 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HOXA9P31269 NPM1P5-201ENST00000557228 838 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 AC009962.1-201ENST00000567327 3813 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA9P31269 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA9P31269 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA9P31269 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA9P31269 AL353662.3-201ENST00000625131 237 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
HOXA9P31269 AC099654.11-201ENST00000638857 294 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 AC073869.8-201ENST00000641806 335 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA9P31269 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA9P31269 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA9P31269 AC097063.1-201ENST00000426714 1797 ntBASIC5.59□□□□□ -1.51
HOXA9P31269 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA9P31269 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HOXA9P31269 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HOXA9P31269 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HOXA9P31269 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HOXA9P31269 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXA9P31269 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 SNURFL-201ENST00000309296 343 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 RNA5SP453-201ENST00000362503 119 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 RN7SKP103-201ENST00000363848 320 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXA9P31269 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA9P31269 RPA2P2-201ENST00000419698 796 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 BX276092.6-201ENST00000430476 250 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA9P31269 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA9P31269 BX276092.8-201ENST00000455722 250 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 SNRPCP3-201ENST00000474888 476 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 AP002373.2-201ENST00000541631 1060 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA9P31269 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA9P31269 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA9P31269 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA9P31269 AC107993.1-201ENST00000591343 684 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA9P31269 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA9P31269 AC100827.5-201ENST00000615883 426 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
HOXA9P31269 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA9P31269 AC092747.4-201ENST00000620519 1861 ntBASIC5.58□□□□□ -1.52
HOXA9P31269 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA9P31269 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA9P31269 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA9P31269 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA9P31269 AC109446.4-201ENST00000623235 2755 ntBASIC5.57□□□□□ -1.52
HOXA9P31269 SAMM50P1-201ENST00000455403 1399 ntBASIC5.57□□□□□ -1.52
HOXA9P31269 AL034549.2-201ENST00000618285 3373 ntBASIC5.57□□□□□ -1.52
HOXA9P31269 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXA9P31269 RN7SKP104-201ENST00000362605 328 ntBASIC5.57□□□□□ -1.52
HOXA9P31269 U3.3-201ENST00000362986 216 ntBASIC5.57□□□□□ -1.52
HOXA9P31269 SNORD56.6-201ENST00000384569 71 ntBASIC5.57□□□□□ -1.52
HOXA9P31269 NPM1P37-201ENST00000403105 874 ntBASIC5.57□□□□□ -1.52
HOXA9P31269 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXA9P31269 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA9P31269 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA9P31269 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA9P31269 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA9P31269 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA9P31269 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA9P31269 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA9P31269 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms