Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A5P29400 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A5P29400 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A5P29400 AC016251.2-201ENST00000623393 3089 ntBASIC6.11□□□□□ -1.43
COL4A5P29400 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.11□□□□□ -1.43
COL4A5P29400 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A5P29400 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A5P29400 CCT8P1-201ENST00000413611 1657 ntBASIC6.11□□□□□ -1.43
COL4A5P29400 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL4A5P29400 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A5P29400 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A5P29400 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
COL4A5P29400 AC073143.1-201ENST00000436316 395 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 EIF2S2P2-201ENST00000447161 982 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 IGBP1P4-201ENST00000503202 879 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 TOMM20P2-201ENST00000540082 421 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A5P29400 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
COL4A5P29400 AC015712.7-201ENST00000615211 635 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
COL4A5P29400 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A5P29400 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A5P29400 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A5P29400 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.1□□□□□ -1.43
COL4A5P29400 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A5P29400 AL137100.1-201ENST00000556703 1620 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
COL4A5P29400 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A5P29400 RNU4-39P-201ENST00000362455 127 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 BX510359.2-201ENST00000417920 305 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.1□□□□□ -1.43
COL4A5P29400 RN7SL244P-201ENST00000493405 297 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 SCARNA22-201ENST00000503991 125 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A5P29400 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A5P29400 SOX5P1-201ENST00000524155 1127 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.1□□□□□ -1.43
COL4A5P29400 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A5P29400 AC019322.1-201ENST00000571869 389 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 MIR3160-1-201ENST00000577972 85 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A5P29400 AP001521.2-201ENST00000608772 546 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 MLECP1-201ENST00000615893 709 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.1□□□□□ -1.43
COL4A5P29400 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
COL4A5P29400 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 AC006210.2-201ENST00000367074 1545 ntBASIC6.1□□□□□ -1.43
COL4A5P29400 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A5P29400 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A5P29400 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A5P29400 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.09□□□□□ -1.43
COL4A5P29400 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A5P29400 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A5P29400 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.09□□□□□ -1.43
COL4A5P29400 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A5P29400 OR9G4-201ENST00000302957 984 ntBASIC6.09□□□□□ -1.43
COL4A5P29400 U3.30-201ENST00000391308 210 ntBASIC6.09□□□□□ -1.43
COL4A5P29400 AL592293.2-201ENST00000422292 996 ntBASIC6.09□□□□□ -1.43
COL4A5P29400 RPS29P9-201ENST00000440360 171 ntBASIC6.09□□□□□ -1.43
COL4A5P29400 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A5P29400 AC010326.1-201ENST00000462726 602 ntBASIC6.09□□□□□ -1.43
COL4A5P29400 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL4A5P29400 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A5P29400 SCARNA9-201ENST00000530422 353 ntBASIC6.09□□□□□ -1.43
COL4A5P29400 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.09□□□□□ -1.43
COL4A5P29400 MIR4675-201ENST00000577898 77 ntBASIC6.09□□□□□ -1.43
COL4A5P29400 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A5P29400 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A5P29400 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.09□□□□□ -1.43
COL4A5P29400 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.09□□□□□ -1.43
COL4A5P29400 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL4A5P29400 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL4A5P29400 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
COL4A5P29400 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
COL4A5P29400 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
COL4A5P29400 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.08□□□□□ -1.44
COL4A5P29400 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 LINC02035-201ENST00000610128 5476 ntBASIC6.08□□□□□ -1.44
COL4A5P29400 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A5P29400 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
COL4A5P29400 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL4A5P29400 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms