Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 RNU1-11P-201ENST00000383975 164 ntBASIC7.6□□□□□ -1.19
VARSP26640 RNU6-474P-201ENST00000384243 107 ntBASIC7.6□□□□□ -1.19
VARSP26640 MIR217-201ENST00000384817 110 ntBASIC7.6□□□□□ -1.19
VARSP26640 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 MSRB1P1-201ENST00000396851 354 ntBASIC7.6□□□□□ -1.19
VARSP26640 PEX12P1-201ENST00000400284 1048 ntBASIC7.6□□□□□ -1.19
VARSP26640 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 MTCO2P5-201ENST00000422621 426 ntBASIC7.6□□□□□ -1.19
VARSP26640 RPL35AP12-201ENST00000425362 338 ntBASIC7.6□□□□□ -1.19
VARSP26640 Z93242.1-201ENST00000427102 353 ntBASIC7.6□□□□□ -1.19
VARSP26640 OR2B7P-201ENST00000429302 934 ntBASIC7.6□□□□□ -1.19
VARSP26640 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.6□□□□□ -1.19
VARSP26640 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 PPIAP17-201ENST00000438507 471 ntBASIC7.6□□□□□ -1.19
VARSP26640 AL512605.1-202ENST00000441919 381 ntBASIC7.6□□□□□ -1.19
VARSP26640 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 AC104306.1-201ENST00000449702 371 ntBASIC7.6□□□□□ -1.19
VARSP26640 AC112206.1-201ENST00000468416 477 ntBASIC7.6□□□□□ -1.19
VARSP26640 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.6□□□□□ -1.19
VARSP26640 AC084871.2-201ENST00000503355 464 ntBASIC7.6□□□□□ -1.19
VARSP26640 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 CCDC34P1-201ENST00000507441 517 ntBASIC7.6□□□□□ -1.19
VARSP26640 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 RNU6-123P-201ENST00000516163 102 ntBASIC7.6□□□□□ -1.19
VARSP26640 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.6□□□□□ -1.19
VARSP26640 GTF2IP11-201ENST00000526931 420 ntBASIC7.6□□□□□ -1.19
VARSP26640 HIGD1AP9-201ENST00000550710 279 ntBASIC7.6□□□□□ -1.19
VARSP26640 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.6□□□□□ -1.19
VARSP26640 RPL21P5-201ENST00000554662 472 ntBASIC7.6□□□□□ -1.19
VARSP26640 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
VARSP26640 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 AC110588.1-201ENST00000559699 137 ntBASIC7.6□□□□□ -1.19
VARSP26640 AL845331.3-202ENST00000562856 261 ntBASIC7.6□□□□□ -1.19
VARSP26640 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC7.6□□□□□ -1.19
VARSP26640 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 AC019322.1-201ENST00000571869 389 ntBASIC7.6□□□□□ -1.19
VARSP26640 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.6□□□□□ -1.19
VARSP26640 MIR3682-201ENST00000581338 84 ntBASIC7.6□□□□□ -1.19
VARSP26640 PRR13P5-201ENST00000596581 442 ntBASIC7.6□□□□□ -1.19
VARSP26640 7SK.7-201ENST00000603504 247 ntBASIC7.6□□□□□ -1.19
VARSP26640 AC004853.1-201ENST00000604902 698 ntBASIC7.6□□□□□ -1.19
VARSP26640 AC087623.4-201ENST00000606593 695 ntBASIC7.6□□□□□ -1.19
VARSP26640 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 uc_338.5-201ENST00000611839 155 ntBASIC7.6□□□□□ -1.19
VARSP26640 RNVU1-19-201ENST00000613023 167 ntBASIC7.6□□□□□ -1.19
VARSP26640 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.6□□□□□ -1.19
VARSP26640 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 AC129778.1-202ENST00000623812 261 ntBASIC7.6□□□□□ -1.19
VARSP26640 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 AL591379.1-207ENST00000635982 261 ntBASIC7.6□□□□□ -1.19
VARSP26640 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.6□□□□□ -1.19
VARSP26640 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
VARSP26640 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 COL6A4P1-202ENST00000487147 4317 ntBASIC7.6□□□□□ -1.19
VARSP26640 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 AC092821.2-201ENST00000545710 2042 ntBASIC7.6□□□□□ -1.19
VARSP26640 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.6□□□□□ -1.19
VARSP26640 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.6□□□□□ -1.19
VARSP26640 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 AC133552.3-201ENST00000572236 1869 ntBASIC7.6□□□□□ -1.19
VARSP26640 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARSP26640 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
VARSP26640 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.59□□□□□ -1.19
VARSP26640 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARSP26640 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.59□□□□□ -1.19
VARSP26640 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
VARSP26640 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARSP26640 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.59□□□□□ -1.19
VARSP26640 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.59□□□□□ -1.19
VARSP26640 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARSP26640 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
VARSP26640 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.59□□□□□ -1.19
VARSP26640 Y_RNA.157-201ENST00000363638 102 ntBASIC7.59□□□□□ -1.19
VARSP26640 AL672167.2-201ENST00000377164 879 ntBASIC7.59□□□□□ -1.19
VARSP26640 RNU6-533P-201ENST00000384144 107 ntBASIC7.59□□□□□ -1.19
VARSP26640 SNORA7B-201ENST00000384360 139 ntBASIC7.59□□□□□ -1.19
VARSP26640 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARSP26640 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARSP26640 RN7SKP89-201ENST00000410774 242 ntBASIC7.59□□□□□ -1.19
VARSP26640 RN7SKP140-201ENST00000411196 284 ntBASIC7.59□□□□□ -1.19
VARSP26640 AC092745.2-202ENST00000411880 369 ntBASIC7.59□□□□□ -1.19
VARSP26640 RBMY2GP-201ENST00000418671 1034 ntBASIC7.59□□□□□ -1.19
VARSP26640 RPA2P2-201ENST00000419698 796 ntBASIC7.59□□□□□ -1.19
VARSP26640 BMS1P19-201ENST00000433925 393 ntBASIC7.59□□□□□ -1.19
VARSP26640 NPM1P18-201ENST00000434232 732 ntBASIC7.59□□□□□ -1.19
VARSP26640 RBMY2NP-201ENST00000434454 1028 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms