Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL8A2P25067 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
COL8A2P25067 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
COL8A2P25067 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL8A2P25067 AC003973.3-201ENST00000624863 2822 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL8A2P25067 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL8A2P25067 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.47□□□□□ -1.69
COL8A2P25067 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL8A2P25067 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL8A2P25067 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL8A2P25067 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.47□□□□□ -1.69
COL8A2P25067 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL8A2P25067 MIR600-201ENST00000385007 98 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 PPIAP9-201ENST00000403866 498 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 U3.36-201ENST00000408418 213 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 RN7SKP213-201ENST00000410746 298 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AC211486.3-201ENST00000412694 621 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.47□□□□□ -1.69
COL8A2P25067 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.47□□□□□ -1.69
COL8A2P25067 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.47□□□□□ -1.69
COL8A2P25067 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.47□□□□□ -1.69
COL8A2P25067 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.47□□□□□ -1.69
COL8A2P25067 NDUFB4P8-201ENST00000435351 367 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.47□□□□□ -1.69
COL8A2P25067 CEACAMP7-201ENST00000444105 496 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.47□□□□□ -1.69
COL8A2P25067 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL8A2P25067 RPL7AP6-201ENST00000477943 801 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.47□□□□□ -1.69
COL8A2P25067 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.47□□□□□ -1.69
COL8A2P25067 RN7SKP66-201ENST00000516681 231 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.47□□□□□ -1.69
COL8A2P25067 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AC130364.2-201ENST00000528639 604 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.47□□□□□ -1.69
COL8A2P25067 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.47□□□□□ -1.69
COL8A2P25067 AC006116.3-201ENST00000592968 361 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AC087763.1-201ENST00000603391 286 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AC009027.1-201ENST00000604510 479 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AL139124.1-201ENST00000609123 421 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AC118658.2-201ENST00000618697 459 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AC090527.3-201ENST00000619041 548 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 uc_338.7-201ENST00000621834 124 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 AC005261.6-201ENST00000623072 1387 ntBASIC4.47□□□□□ -1.69
COL8A2P25067 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL8A2P25067 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.47□□□□□ -1.69
COL8A2P25067 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.47□□□□□ -1.69
COL8A2P25067 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.47□□□□□ -1.69
COL8A2P25067 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.47□□□□□ -1.69
COL8A2P25067 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.46□□□□□ -1.69
COL8A2P25067 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
COL8A2P25067 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
COL8A2P25067 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
COL8A2P25067 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
COL8A2P25067 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL8A2P25067 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL8A2P25067 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.46□□□□□ -1.7
COL8A2P25067 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.46□□□□□ -1.7
COL8A2P25067 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
COL8A2P25067 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL8A2P25067 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
COL8A2P25067 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL8A2P25067 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.46□□□□□ -1.7
COL8A2P25067 RNU1-106P-201ENST00000384382 164 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.46□□□□□ -1.7
COL8A2P25067 RN7SKP126-201ENST00000411143 300 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 AL158827.1-201ENST00000416300 391 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 AC093162.1-201ENST00000419682 124 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 NPM1P22-201ENST00000427761 952 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 HSPE1P27-201ENST00000430808 296 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 Z92846.1-201ENST00000456203 268 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 BX284632.1-201ENST00000478218 541 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.46□□□□□ -1.7
COL8A2P25067 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.46□□□□□ -1.7
COL8A2P25067 GLUD1P3-202ENST00000508551 200 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.46□□□□□ -1.7
COL8A2P25067 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.46□□□□□ -1.7
COL8A2P25067 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.46□□□□□ -1.7
COL8A2P25067 OR4A46P-201ENST00000527255 933 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
COL8A2P25067 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.46□□□□□ -1.7
COL8A2P25067 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.46□□□□□ -1.7
COL8A2P25067 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.46□□□□□ -1.7
COL8A2P25067 RN7SL708P-201ENST00000580952 299 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.46□□□□□ -1.7
COL8A2P25067 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.46□□□□□ -1.7
COL8A2P25067 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.46□□□□□ -1.7
COL8A2P25067 AC244107.2-201ENST00000611773 76 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 AC009163.6-201ENST00000612367 342 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 MIR6730-201ENST00000622213 67 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 AP003400.3-201ENST00000624904 346 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 AC099654.6-201ENST00000636487 512 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 AC099654.11-201ENST00000638857 294 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 CASC19-222ENST00000641321 1173 ntBASIC4.46□□□□□ -1.7
COL8A2P25067 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.46□□□□□ -1.7
COL8A2P25067 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL8A2P25067 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.46□□□□□ -1.7
COL8A2P25067 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
COL8A2P25067 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms