Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PCNAP12004 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 AL136520.1-201ENST00000600311 1322 ntBASIC5.55□□□□□ -1.52
PCNAP12004 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 AL357752.1-201ENST00000412817 349 ntBASIC5.55□□□□□ -1.52
PCNAP12004 MRPL53P1-201ENST00000414323 319 ntBASIC5.55□□□□□ -1.52
PCNAP12004 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 AL158827.1-201ENST00000416300 391 ntBASIC5.55□□□□□ -1.52
PCNAP12004 AL121882.1-201ENST00000422893 417 ntBASIC5.55□□□□□ -1.52
PCNAP12004 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
PCNAP12004 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 VN1R21P-201ENST00000426703 765 ntBASIC5.55□□□□□ -1.52
PCNAP12004 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 VN1R110P-201ENST00000438988 971 ntBASIC5.55□□□□□ -1.52
PCNAP12004 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 AL513321.1-201ENST00000441175 761 ntBASIC5.55□□□□□ -1.52
PCNAP12004 GXYLT1P1-201ENST00000446657 490 ntBASIC5.55□□□□□ -1.52
PCNAP12004 AC083899.1-201ENST00000454465 3819 ntBASIC5.55□□□□□ -1.52
PCNAP12004 MTND2P6-201ENST00000455337 1030 ntBASIC5.55□□□□□ -1.52
PCNAP12004 MTND6P32-201ENST00000457611 483 ntBASIC5.55□□□□□ -1.52
PCNAP12004 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 RN7SL741P-201ENST00000482473 289 ntBASIC5.55□□□□□ -1.52
PCNAP12004 AC093663.2-201ENST00000484625 313 ntBASIC5.55□□□□□ -1.52
PCNAP12004 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.55□□□□□ -1.52
PCNAP12004 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.55□□□□□ -1.52
PCNAP12004 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.55□□□□□ -1.52
PCNAP12004 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.55□□□□□ -1.52
PCNAP12004 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.55□□□□□ -1.52
PCNAP12004 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.55□□□□□ -1.52
PCNAP12004 NOP56P3-201ENST00000549457 385 ntBASIC5.55□□□□□ -1.52
PCNAP12004 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.55□□□□□ -1.52
PCNAP12004 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 HIRAP1-201ENST00000605318 787 ntBASIC5.55□□□□□ -1.52
PCNAP12004 MIR6071-201ENST00000616741 78 ntBASIC5.55□□□□□ -1.52
PCNAP12004 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
PCNAP12004 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCNAP12004 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PCNAP12004 LINC01963-201ENST00000562038 3148 ntBASIC5.54□□□□□ -1.52
PCNAP12004 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCNAP12004 AL022311.1-201ENST00000623726 19416 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AC104964.3-201ENST00000606115 2860 ntBASIC5.54□□□□□ -1.52
PCNAP12004 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCNAP12004 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCNAP12004 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCNAP12004 RNU1-146P-201ENST00000364015 165 ntBASIC5.54□□□□□ -1.52
PCNAP12004 RNU6-1251P-201ENST00000364502 107 ntBASIC5.54□□□□□ -1.52
PCNAP12004 SUGT1P2-201ENST00000379452 992 ntBASIC5.54□□□□□ -1.52
PCNAP12004 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.54□□□□□ -1.52
PCNAP12004 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCNAP12004 AC087752.1-201ENST00000391360 558 ntBASIC5.54□□□□□ -1.52
PCNAP12004 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 OR7E156P-201ENST00000400303 464 ntBASIC5.54□□□□□ -1.52
PCNAP12004 VN1R12P-201ENST00000403778 876 ntBASIC5.54□□□□□ -1.52
PCNAP12004 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCNAP12004 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.54□□□□□ -1.52
PCNAP12004 PTP4A1P1-201ENST00000420539 515 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.54□□□□□ -1.52
PCNAP12004 BX323845.3-201ENST00000428215 527 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 AC138761.5-201ENST00000433967 325 ntBASIC5.54□□□□□ -1.52
PCNAP12004 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 PCBP2P1-201ENST00000437262 977 ntBASIC5.54□□□□□ -1.52
PCNAP12004 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.54□□□□□ -1.52
PCNAP12004 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.54□□□□□ -1.52
PCNAP12004 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.54□□□□□ -1.52
PCNAP12004 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.54□□□□□ -1.52
PCNAP12004 PDCL3P4-201ENST00000489621 720 ntBASIC5.54□□□□□ -1.52
PCNAP12004 DUTP1-201ENST00000493631 470 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms