Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC005297.1-201ENST00000444765 862 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 CASP3P1-201ENST00000446037 609 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AL133477.1-201ENST00000457472 514 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 NXT1P1-201ENST00000458481 316 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 PGBD4P4-201ENST00000509673 613 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 PRMT5P1-201ENST00000514351 598 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 LECT2-205ENST00000522943 574 ntTSL 3 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 ACTR3BP3-201ENST00000565577 979 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AL445423.1-201ENST00000609941 536 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC073114.1-201ENST00000612027 490 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 AC124312.6-202ENST00000623624 418 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 CASC19-264ENST00000641912 1184 ntBASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.54□□□□□ -1.04
CSB-PGBD3P0DP91 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AL078595.2-201ENST00000605309 1780 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC061975.7-201ENST00000592016 2692 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 DNAJC19P6-201ENST00000401853 280 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 OR8G2P-201ENST00000412796 908 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 ELOCP9-201ENST00000418624 239 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 RPA2P2-201ENST00000419698 796 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 HIGD1AP12-201ENST00000427832 281 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC129850.1-201ENST00000436203 508 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 MTND5P2-201ENST00000442927 1142 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 ELOCP23-201ENST00000452014 332 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 MRPL35P4-201ENST00000453682 566 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 ACA64.1-201ENST00000459171 127 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 SSX8-201ENST00000506270 579 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 KHDC1P1-201ENST00000511053 508 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC138938.1-201ENST00000515431 782 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 IGHV4-55-201ENST00000520889 368 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 OR8G3P-201ENST00000533406 921 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC068305.2-201ENST00000550567 1205 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 DPRXP5-201ENST00000604662 539 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC018618.2-201ENST00000604770 446 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC008555.7-201ENST00000605008 583 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC024589.2-201ENST00000605642 1294 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AL031601.1-201ENST00000605702 394 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 RFPL4AP6-201ENST00000616792 846 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC034229.6-201ENST00000623704 224 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 CASC19-205ENST00000641013 1411 ntBASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CSB-PGBD3P0DP91 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
CSB-PGBD3P0DP91 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.52□□□□□ -1.04
CSB-PGBD3P0DP91 AL139384.2-201ENST00000613809 3590 ntBASIC8.52□□□□□ -1.04
CSB-PGBD3P0DP91 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.52□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms