Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTNP04004 AC108738.1-201ENST00000603703 237 ntBASIC5.79□□□□□ -1.48
VTNP04004 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
VTNP04004 uc_338.7-201ENST00000621834 124 ntBASIC5.79□□□□□ -1.48
VTNP04004 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTNP04004 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTNP04004 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.79□□□□□ -1.48
VTNP04004 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTNP04004 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTNP04004 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTNP04004 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
VTNP04004 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTNP04004 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTNP04004 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
VTNP04004 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.78□□□□□ -1.48
VTNP04004 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 SNURFL-201ENST00000309296 343 ntBASIC5.78□□□□□ -1.48
VTNP04004 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.78□□□□□ -1.48
VTNP04004 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.78□□□□□ -1.48
VTNP04004 VN1R54P-201ENST00000435210 1049 ntBASIC5.78□□□□□ -1.48
VTNP04004 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.78□□□□□ -1.48
VTNP04004 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.78□□□□□ -1.48
VTNP04004 AC002075.1-201ENST00000457396 676 ntBASIC5.78□□□□□ -1.48
VTNP04004 AC093827.1-201ENST00000480094 861 ntBASIC5.78□□□□□ -1.48
VTNP04004 HMGN1P9-201ENST00000515212 298 ntBASIC5.78□□□□□ -1.48
VTNP04004 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.78□□□□□ -1.48
VTNP04004 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.78□□□□□ -1.48
VTNP04004 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.78□□□□□ -1.48
VTNP04004 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.78□□□□□ -1.48
VTNP04004 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.78□□□□□ -1.48
VTNP04004 MTATP6P25-201ENST00000574491 261 ntBASIC5.78□□□□□ -1.48
VTNP04004 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.78□□□□□ -1.48
VTNP04004 AC011447.4-201ENST00000587562 111 ntBASIC5.78□□□□□ -1.48
VTNP04004 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.78□□□□□ -1.48
VTNP04004 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.78□□□□□ -1.48
VTNP04004 MTCO1P1-201ENST00000624263 1081 ntBASIC5.78□□□□□ -1.48
VTNP04004 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.78□□□□□ -1.48
VTNP04004 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 AC000095.2-202ENST00000637415 154 ntBASIC5.78□□□□□ -1.48
VTNP04004 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.78□□□□□ -1.48
VTNP04004 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
VTNP04004 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
VTNP04004 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.78□□□□□ -1.48
VTNP04004 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VTNP04004 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.77□□□□□ -1.49
VTNP04004 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
VTNP04004 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.77□□□□□ -1.49
VTNP04004 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VTNP04004 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTNP04004 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.77□□□□□ -1.49
VTNP04004 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.77□□□□□ -1.49
VTNP04004 RN7SKP185-201ENST00000362813 326 ntBASIC5.77□□□□□ -1.49
VTNP04004 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.77□□□□□ -1.49
VTNP04004 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.77□□□□□ -1.49
VTNP04004 MIR585-201ENST00000384887 94 ntBASIC5.77□□□□□ -1.49
VTNP04004 RPL7P58-201ENST00000402913 758 ntBASIC5.77□□□□□ -1.49
VTNP04004 RN7SKP17-201ENST00000411242 351 ntBASIC5.77□□□□□ -1.49
VTNP04004 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VTNP04004 AL133482.1-201ENST00000415988 498 ntBASIC5.77□□□□□ -1.49
VTNP04004 RPS26P13-201ENST00000419030 330 ntBASIC5.77□□□□□ -1.49
VTNP04004 RPS4XP16-201ENST00000427198 791 ntBASIC5.77□□□□□ -1.49
VTNP04004 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VTNP04004 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.77□□□□□ -1.49
VTNP04004 AC013410.1-201ENST00000436223 1232 ntBASIC5.77□□□□□ -1.49
VTNP04004 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.77□□□□□ -1.49
VTNP04004 snoU13.20-201ENST00000459180 104 ntBASIC5.77□□□□□ -1.49
VTNP04004 IGBP1P4-201ENST00000503202 879 ntBASIC5.77□□□□□ -1.49
VTNP04004 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTNP04004 GLUD1P3-202ENST00000508551 200 ntBASIC5.77□□□□□ -1.49
VTNP04004 AP000676.2-201ENST00000529711 301 ntBASIC5.77□□□□□ -1.49
VTNP04004 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VTNP04004 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTNP04004 AL137058.3-201ENST00000624531 3099 ntBASIC5.77□□□□□ -1.49
VTNP04004 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
VTNP04004 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.77□□□□□ -1.49
VTNP04004 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTNP04004 AL138820.1-201ENST00000617901 5305 ntBASIC5.77□□□□□ -1.49
VTNP04004 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VTNP04004 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.76□□□□□ -1.49
VTNP04004 AC023421.1-201ENST00000590535 1785 ntBASIC5.76□□□□□ -1.49
VTNP04004 AC103591.2-201ENST00000265259 766 ntBASIC5.76□□□□□ -1.49
VTNP04004 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
VTNP04004 RNA5SP90-201ENST00000364801 99 ntBASIC5.76□□□□□ -1.49
VTNP04004 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTNP04004 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VTNP04004 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.76□□□□□ -1.49
VTNP04004 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTNP04004 RPS29P10-201ENST00000439197 166 ntBASIC5.76□□□□□ -1.49
VTNP04004 DNAJB5P1-201ENST00000454004 806 ntBASIC5.76□□□□□ -1.49
VTNP04004 AC079168.1-201ENST00000458741 345 ntBASIC5.76□□□□□ -1.49
VTNP04004 ABCC13-202ENST00000463099 3842 ntBASIC5.76□□□□□ -1.49
VTNP04004 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms