Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 MTCO1P8-201ENST00000416914 1523 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.06□□□□□ -1.6
MT-ND1P03886 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 AC063976.2-201ENST00000425667 3556 ntBASIC5.06□□□□□ -1.6
MT-ND1P03886 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
MT-ND1P03886 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MT-ND1P03886 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 NEPNP-201ENST00000404786 1371 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.05□□□□□ -1.6
MT-ND1P03886 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
MT-ND1P03886 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
MT-ND1P03886 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.05□□□□□ -1.6
MT-ND1P03886 RMRPP5-201ENST00000411156 267 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 AC066692.1-201ENST00000421721 457 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.05□□□□□ -1.6
MT-ND1P03886 ARL4AP4-201ENST00000434170 518 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.05□□□□□ -1.6
MT-ND1P03886 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.05□□□□□ -1.6
MT-ND1P03886 AL450023.1-201ENST00000450868 751 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.05□□□□□ -1.6
MT-ND1P03886 OR11I1P-201ENST00000486033 954 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.05□□□□□ -1.6
MT-ND1P03886 RPS12P31-201ENST00000491419 398 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.05□□□□□ -1.6
MT-ND1P03886 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.05□□□□□ -1.6
MT-ND1P03886 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.05□□□□□ -1.6
MT-ND1P03886 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.05□□□□□ -1.6
MT-ND1P03886 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.05□□□□□ -1.6
MT-ND1P03886 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.05□□□□□ -1.6
MT-ND1P03886 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.05□□□□□ -1.6
MT-ND1P03886 AC092121.1-201ENST00000569452 202 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.05□□□□□ -1.6
MT-ND1P03886 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 SAMMSON-227ENST00000642114 1199 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 AC100778.3-201ENST00000580060 1750 ntBASIC5.05□□□□□ -1.6
MT-ND1P03886 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.05□□□□□ -1.6
MT-ND1P03886 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
MT-ND1P03886 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.05□□□□□ -1.6
MT-ND1P03886 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
MT-ND1P03886 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MT-ND1P03886 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
MT-ND1P03886 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.05□□□□□ -1.6
MT-ND1P03886 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.05□□□□□ -1.6
MT-ND1P03886 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.05□□□□□ -1.6
MT-ND1P03886 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.04□□□□□ -1.6
MT-ND1P03886 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
MT-ND1P03886 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
MT-ND1P03886 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MT-ND1P03886 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
MT-ND1P03886 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.04□□□□□ -1.6
MT-ND1P03886 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MT-ND1P03886 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MT-ND1P03886 SMG1P4-204ENST00000523028 4131 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
MT-ND1P03886 RNA5SP433-201ENST00000364491 114 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 RN7SKP275-201ENST00000364626 301 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MT-ND1P03886 RPS3AP2-201ENST00000407190 754 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.04□□□□□ -1.6
MT-ND1P03886 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MT-ND1P03886 AC244453.4-201ENST00000419150 388 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.04□□□□□ -1.6
MT-ND1P03886 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.04□□□□□ -1.6
MT-ND1P03886 AC127526.2-201ENST00000426436 775 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 RPL12P18-201ENST00000437175 325 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.04□□□□□ -1.6
MT-ND1P03886 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.04□□□□□ -1.6
MT-ND1P03886 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.04□□□□□ -1.6
MT-ND1P03886 RPS23P6-201ENST00000466136 431 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 AC069304.1-201ENST00000491593 704 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.04□□□□□ -1.6
MT-ND1P03886 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.04□□□□□ -1.6
MT-ND1P03886 AC109464.1-201ENST00000511091 819 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 MRPS16P1-201ENST00000523462 412 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 TRIM77BP-201ENST00000524985 1119 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.04□□□□□ -1.6
MT-ND1P03886 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.04□□□□□ -1.6
MT-ND1P03886 MTND2P13-201ENST00000577438 1039 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 AC022884.2-201ENST00000578535 580 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 AP000919.1-201ENST00000582850 985 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 AC015802.2-201ENST00000589690 189 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MT-ND1P03886 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.04□□□□□ -1.6
MT-ND1P03886 AL365181.4-201ENST00000609800 547 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 AC107905.1-201ENST00000616204 426 ntBASIC5.04□□□□□ -1.6
MT-ND1P03886 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.04□□□□□ -1.6
MT-ND1P03886 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MT-ND1P03886 FO681491.1-202ENST00000623392 737 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms