Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.63□□□□□ -1.51
APOEP02649 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.63□□□□□ -1.51
APOEP02649 AC074101.1-201ENST00000637861 241 ntBASIC5.63□□□□□ -1.51
APOEP02649 AC073869.8-201ENST00000641806 335 ntBASIC5.63□□□□□ -1.51
APOEP02649 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
APOEP02649 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.63□□□□□ -1.51
APOEP02649 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.63□□□□□ -1.51
APOEP02649 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
APOEP02649 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.63□□□□□ -1.51
APOEP02649 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
APOEP02649 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.62□□□□□ -1.51
APOEP02649 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
APOEP02649 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
APOEP02649 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
APOEP02649 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.62□□□□□ -1.51
APOEP02649 RNA5SP487-201ENST00000410186 122 ntBASIC5.62□□□□□ -1.51
APOEP02649 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.62□□□□□ -1.51
APOEP02649 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.62□□□□□ -1.51
APOEP02649 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.62□□□□□ -1.51
APOEP02649 RPL5P25-201ENST00000441148 775 ntBASIC5.62□□□□□ -1.51
APOEP02649 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.62□□□□□ -1.51
APOEP02649 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.62□□□□□ -1.51
APOEP02649 RPEP1-201ENST00000504507 658 ntBASIC5.62□□□□□ -1.51
APOEP02649 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.62□□□□□ -1.51
APOEP02649 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.62□□□□□ -1.51
APOEP02649 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.62□□□□□ -1.51
APOEP02649 AL049779.2-201ENST00000553847 315 ntBASIC5.62□□□□□ -1.51
APOEP02649 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
APOEP02649 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
APOEP02649 RBM22P1-201ENST00000578589 1214 ntBASIC5.62□□□□□ -1.51
APOEP02649 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
APOEP02649 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.62□□□□□ -1.51
APOEP02649 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.62□□□□□ -1.51
APOEP02649 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.62□□□□□ -1.51
APOEP02649 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.62□□□□□ -1.51
APOEP02649 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.62□□□□□ -1.51
APOEP02649 IMMP1LP3-201ENST00000604197 224 ntBASIC5.62□□□□□ -1.51
APOEP02649 AP000894.4-201ENST00000610185 483 ntBASIC5.62□□□□□ -1.51
APOEP02649 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.62□□□□□ -1.51
APOEP02649 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
APOEP02649 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
APOEP02649 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.62□□□□□ -1.51
APOEP02649 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
APOEP02649 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
APOEP02649 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
APOEP02649 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
APOEP02649 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
APOEP02649 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
APOEP02649 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
APOEP02649 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
APOEP02649 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
APOEP02649 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.61□□□□□ -1.51
APOEP02649 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
APOEP02649 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
APOEP02649 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
APOEP02649 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
APOEP02649 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
APOEP02649 AL390774.1-201ENST00000411924 246 ntBASIC5.61□□□□□ -1.51
APOEP02649 AP000534.2-201ENST00000412729 568 ntBASIC5.61□□□□□ -1.51
APOEP02649 FAM96AP1-201ENST00000430879 482 ntBASIC5.61□□□□□ -1.51
APOEP02649 RPL7L1P9-201ENST00000431298 745 ntBASIC5.61□□□□□ -1.51
APOEP02649 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.61□□□□□ -1.51
APOEP02649 GAPDHP25-201ENST00000447061 1001 ntBASIC5.61□□□□□ -1.51
APOEP02649 CBX1P2-201ENST00000453841 458 ntBASIC5.61□□□□□ -1.51
APOEP02649 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.61□□□□□ -1.51
APOEP02649 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.61□□□□□ -1.51
APOEP02649 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
APOEP02649 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.61□□□□□ -1.51
APOEP02649 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
APOEP02649 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.61□□□□□ -1.51
APOEP02649 SCARNA21.2-201ENST00000516600 166 ntBASIC5.61□□□□□ -1.51
APOEP02649 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.61□□□□□ -1.51
APOEP02649 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.61□□□□□ -1.51
APOEP02649 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
APOEP02649 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
APOEP02649 AL359219.2-201ENST00000555184 348 ntBASIC5.61□□□□□ -1.51
APOEP02649 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.61□□□□□ -1.51
APOEP02649 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.61□□□□□ -1.51
APOEP02649 MIR4489-201ENST00000578869 62 ntBASIC5.61□□□□□ -1.51
APOEP02649 AP000769.2-201ENST00000602344 396 ntBASIC5.61□□□□□ -1.51
APOEP02649 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.61□□□□□ -1.51
APOEP02649 AC008115.4-201ENST00000619780 775 ntBASIC5.61□□□□□ -1.51
APOEP02649 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.61□□□□□ -1.51
APOEP02649 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
APOEP02649 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
APOEP02649 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
APOEP02649 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
APOEP02649 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
APOEP02649 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.6□□□□□ -1.51
APOEP02649 AC116158.1-201ENST00000560231 2129 ntBASIC5.6□□□□□ -1.51
APOEP02649 AC007342.5-201ENST00000571340 2142 ntBASIC5.6□□□□□ -1.51
APOEP02649 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms