Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL2A1P02458 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.13□□□□□ -1.43
COL2A1P02458 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.13□□□□□ -1.43
COL2A1P02458 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 AC003973.3-201ENST00000624863 2822 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 AC034229.2-201ENST00000566945 2508 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.12□□□□□ -1.43
COL2A1P02458 HSPA8P14-201ENST00000552265 1805 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL2A1P02458 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL2A1P02458 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL2A1P02458 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL2A1P02458 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL2A1P02458 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL2A1P02458 RNA5SP428-201ENST00000365129 132 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 AC068538.1-201ENST00000376856 336 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 MIR589-201ENST00000385238 99 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 RN7SKP17-201ENST00000411242 351 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.12□□□□□ -1.43
COL2A1P02458 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.12□□□□□ -1.43
COL2A1P02458 AC017019.1-201ENST00000426129 261 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.12□□□□□ -1.43
COL2A1P02458 RN7SL481P-201ENST00000477764 299 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 RPL7P16-201ENST00000479738 738 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.12□□□□□ -1.43
COL2A1P02458 HMGN1P9-201ENST00000515212 298 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 RNA5SP43-201ENST00000516559 110 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.12□□□□□ -1.43
COL2A1P02458 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC6.12□□□□□ -1.43
COL2A1P02458 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.12□□□□□ -1.43
COL2A1P02458 AC068790.4-201ENST00000602474 263 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.12□□□□□ -1.43
COL2A1P02458 AL133406.3-201ENST00000606817 541 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 AL356752.1-201ENST00000615844 593 ntBASIC6.12□□□□□ -1.43
COL2A1P02458 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL2A1P02458 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.12□□□□□ -1.43
COL2A1P02458 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.12□□□□□ -1.43
COL2A1P02458 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
COL2A1P02458 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL2A1P02458 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.11□□□□□ -1.43
COL2A1P02458 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.11□□□□□ -1.43
COL2A1P02458 AL731532.1-201ENST00000623972 4236 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.11□□□□□ -1.43
COL2A1P02458 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 RNA5SP455-201ENST00000365190 119 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL2A1P02458 RN7SKP114-201ENST00000410327 279 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 AC099670.2-201ENST00000435130 321 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 AC020898.1-201ENST00000474167 787 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 AC093827.1-201ENST00000480094 861 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 HMGN2P25-201ENST00000486956 268 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 RN7SL205P-201ENST00000490174 284 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 RPS12P31-201ENST00000491419 398 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 AC008897.1-201ENST00000494006 347 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.11□□□□□ -1.43
COL2A1P02458 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.11□□□□□ -1.43
COL2A1P02458 RN7SL52P-201ENST00000584271 284 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 AC093388.1-201ENST00000609166 430 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 RN7SL722P-201ENST00000617780 284 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 RN7SL565P-201ENST00000618246 284 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 AC009704.2-201ENST00000618739 483 ntBASIC6.11□□□□□ -1.43
COL2A1P02458 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.11□□□□□ -1.43
COL2A1P02458 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.11□□□□□ -1.43
COL2A1P02458 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.11□□□□□ -1.43
COL2A1P02458 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.11□□□□□ -1.43
COL2A1P02458 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.11□□□□□ -1.43
COL2A1P02458 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL2A1P02458 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL2A1P02458 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL2A1P02458 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.1□□□□□ -1.43
COL2A1P02458 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.1□□□□□ -1.43
COL2A1P02458 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL2A1P02458 MIR23A-201ENST00000385245 73 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 AP002530.1-201ENST00000405705 684 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 GJA6P-201ENST00000415117 1042 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.1□□□□□ -1.43
COL2A1P02458 AC010740.1-201ENST00000417035 684 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.1□□□□□ -1.43
COL2A1P02458 OR7E125P-201ENST00000443450 846 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.1□□□□□ -1.43
COL2A1P02458 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.1□□□□□ -1.43
COL2A1P02458 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.1□□□□□ -1.43
COL2A1P02458 AC021006.3-201ENST00000530771 192 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms