Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PDGFBP01127 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 MFSD8-216ENST00000641147 4009 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 HSPD1P7-201ENST00000447985 1686 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDGFBP01127 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFBP01127 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDGFBP01127 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFBP01127 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFBP01127 RAB9AP4-201ENST00000415230 609 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 COX6B1P1-201ENST00000415962 213 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 AC007562.1-201ENST00000421819 517 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 MTCYBP21-201ENST00000443300 1113 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 AC023274.2-201ENST00000445264 521 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 RPL7P16-201ENST00000479738 738 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFBP01127 IGBP1P5-201ENST00000507524 1000 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFBP01127 AC093799.2-201ENST00000610062 578 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 AL158062.1-201ENST00000619632 745 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFBP01127 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 AC022034.1-201ENST00000512867 2156 ntBASIC5.57□□□□□ -1.52
PDGFBP01127 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
PDGFBP01127 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFBP01127 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.57□□□□□ -1.52
PDGFBP01127 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.57□□□□□ -1.52
PDGFBP01127 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFBP01127 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFBP01127 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PDGFBP01127 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFBP01127 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFBP01127 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
PDGFBP01127 AC132825.1-201ENST00000463573 2247 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PDGFBP01127 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PDGFBP01127 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFBP01127 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDGFBP01127 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 MIR137-201ENST00000385223 102 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 GAPDHP15-201ENST00000398586 975 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 RPS4XP9-201ENST00000405151 780 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 RPS16P5-201ENST00000406501 404 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFBP01127 OR2AM1P-201ENST00000422137 422 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFBP01127 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFBP01127 GSTM5P1-201ENST00000434751 660 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFBP01127 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFBP01127 RN7SL817P-201ENST00000480777 288 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFBP01127 EIF3KP3-201ENST00000514461 639 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFBP01127 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFBP01127 OR4A40P-201ENST00000533878 948 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PDGFBP01127 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFBP01127 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFBP01127 MIR4311-201ENST00000580794 100 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 AC011447.4-201ENST00000587562 111 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFBP01127 AL031320.1-201ENST00000604177 357 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 EIF3FP1-201ENST00000613970 806 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 AC021422.1-201ENST00000621212 473 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 AC099494.2-201ENST00000623371 978 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDGFBP01127 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFBP01127 MFSD8-239ENST00000641590 2479 ntBASIC5.56□□□□□ -1.52
PDGFBP01127 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFBP01127 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PDGFBP01127 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDGFBP01127 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFBP01127 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PDGFBP01127 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFBP01127 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PDGFBP01127 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFBP01127 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms