Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC092681.3-201ENST00000609463 678 ntBASIC4.48□□□□□ -1.69
UPK1BO75841 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.48□□□□□ -1.69
UPK1BO75841 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.48□□□□□ -1.69
UPK1BO75841 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UPK1BO75841 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.48□□□□□ -1.69
UPK1BO75841 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UPK1BO75841 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UPK1BO75841 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.48□□□□□ -1.69
UPK1BO75841 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UPK1BO75841 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UPK1BO75841 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
UPK1BO75841 QRSL1P1-201ENST00000400977 1540 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 IRF5P1-201ENST00000504852 2164 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 RNA5SP500-201ENST00000364486 119 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 SUGT1P2-201ENST00000379452 992 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 MIR551A-201ENST00000385042 96 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.47□□□□□ -1.69
UPK1BO75841 Z93019.1-201ENST00000416450 973 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 PDSS1P1-201ENST00000422953 1114 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 AC126120.1-201ENST00000431082 470 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.47□□□□□ -1.69
UPK1BO75841 CLUHP1-201ENST00000435012 1190 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 AL592114.2-201ENST00000440142 532 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 ARAFP2-201ENST00000440565 559 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1BO75841 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1BO75841 AC005077.1-201ENST00000449226 375 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 PRELID1P3-201ENST00000450055 643 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 AC058823.1-201ENST00000485315 474 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.47□□□□□ -1.69
UPK1BO75841 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
UPK1BO75841 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1BO75841 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1BO75841 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.47□□□□□ -1.69
UPK1BO75841 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.47□□□□□ -1.69
UPK1BO75841 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1BO75841 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1BO75841 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.47□□□□□ -1.69
UPK1BO75841 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.47□□□□□ -1.69
UPK1BO75841 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.47□□□□□ -1.69
UPK1BO75841 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.47□□□□□ -1.69
UPK1BO75841 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 AC004232.3-201ENST00000622977 525 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 KPNA2P2-201ENST00000419546 1489 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
UPK1BO75841 AL359922.3-201ENST00000624779 1670 ntBASIC4.47□□□□□ -1.69
UPK1BO75841 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPK1BO75841 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
UPK1BO75841 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
UPK1BO75841 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.46□□□□□ -1.69
UPK1BO75841 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.46□□□□□ -1.69
UPK1BO75841 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.46□□□□□ -1.7
UPK1BO75841 CR382285.2-201ENST00000624662 1495 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.46□□□□□ -1.7
UPK1BO75841 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1BO75841 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1BO75841 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
UPK1BO75841 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1BO75841 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1BO75841 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1BO75841 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1BO75841 RNU1-74P-201ENST00000384108 171 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
UPK1BO75841 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
UPK1BO75841 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
UPK1BO75841 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1BO75841 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.46□□□□□ -1.7
UPK1BO75841 CDY17P-201ENST00000414121 1282 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.46□□□□□ -1.7
UPK1BO75841 AC006509.1-201ENST00000420788 634 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.46□□□□□ -1.7
UPK1BO75841 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.46□□□□□ -1.7
UPK1BO75841 CDY8P-201ENST00000428380 1279 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 AL161722.2-201ENST00000434731 981 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 AL589765.3-201ENST00000446084 462 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 CDY20P-201ENST00000447528 1279 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.46□□□□□ -1.7
UPK1BO75841 OTX2P1-201ENST00000450956 354 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.46□□□□□ -1.7
UPK1BO75841 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.46□□□□□ -1.7
UPK1BO75841 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.46□□□□□ -1.7
UPK1BO75841 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1BO75841 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPK1BO75841 RPS4XP18-201ENST00000495480 763 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.46□□□□□ -1.7
UPK1BO75841 AC010409.2-201ENST00000505780 478 ntBASIC4.46□□□□□ -1.7
UPK1BO75841 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.46□□□□□ -1.7
UPK1BO75841 AC006427.1-201ENST00000514359 712 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms