Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AL355834.1-201ENST00000556602 3965 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AC023421.1-201ENST00000590535 1785 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC131971.1-201ENST00000332881 1482 ntBASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 RNA5SP453-201ENST00000362503 119 ntBASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AL590762.4-201ENST00000425885 253 ntBASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 RPL7AP49-201ENST00000429522 581 ntBASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AL591438.1-201ENST00000433508 581 ntBASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC090804.1-201ENST00000448870 490 ntBASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC115223.1-201ENST00000466377 870 ntBASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC008536.1-201ENST00000602872 669 ntBASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 AC093799.2-201ENST00000610062 578 ntBASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMIM28A0A1B0GU29 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SMIM28A0A1B0GU29 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SMIM28A0A1B0GU29 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.59□□□□□ -1.52
SMIM28A0A1B0GU29 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 CHMP1B2P-201ENST00000399581 597 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 RBMY2QP-201ENST00000429799 1147 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 BX276092.6-201ENST00000430476 250 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 KNOP1P3-201ENST00000446933 426 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 RPL7P61-201ENST00000451721 751 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 BX276092.8-201ENST00000455722 250 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 RN7SL814P-201ENST00000487715 300 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 NDUFB5P1-201ENST00000508134 564 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AC021193.1-201ENST00000511607 420 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 OR1F2P-201ENST00000570470 933 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 AC004948.1-201ENST00000609858 672 ntBASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMIM28A0A1B0GU29 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 MIR550A3-201ENST00000390735 95 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 RN7SKP114-201ENST00000410327 279 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 GJA6P-201ENST00000415117 1042 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms