Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AL078601.3-201ENST00000573303 535 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 RN7SL154P-201ENST00000578043 324 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-89P-201ENST00000606519 100 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC048380.3-201ENST00000623145 796 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 AC073342.2-201ENST00000595842 1800 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 LINC02035-201ENST00000610128 5476 ntBASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VPS9D1Q9Y2B5 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 CDC27P3-201ENST00000635418 1910 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 MTCO1P25-201ENST00000414449 1799 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 RN7SKP25-201ENST00000362449 308 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-1115P-201ENST00000362490 106 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 Y_RNA.80-201ENST00000362996 102 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 Y_RNA.288-201ENST00000364854 92 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 SNORA73A-201ENST00000364938 206 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 SUGT1P1-201ENST00000379514 476 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AL035467.1-201ENST00000403583 686 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AL356498.1-201ENST00000443334 334 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 MTND3P16-201ENST00000452205 344 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 MEMO1P3-201ENST00000459811 302 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 RN7SL333P-201ENST00000476398 297 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-583P-201ENST00000516012 92 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-182P-201ENST00000516970 105 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 SOX5-213ENST00000541847 758 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 EIF4A1P4-201ENST00000550578 1213 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 BCAP31P2-201ENST00000563143 399 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 BCAP31P1-201ENST00000565437 385 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 BCRP9-201ENST00000605312 388 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AC245407.2-201ENST00000614199 451 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AC104447.1-201ENST00000624214 2124 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AC132825.6-201ENST00000638861 357 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AL596275.2-203ENST00000641951 371 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AC013488.1-201ENST00000526618 1838 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.07□□□□□ -1.12
VPS9D1Q9Y2B5 AC102941.1-201ENST00000567616 1537 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms