Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
PHF8Q9UPP1 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 Y_RNA.315-201ENST00000365117 102 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 SNORA4.3-201ENST00000365564 137 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 YWHAZP6-201ENST00000399764 738 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AL354719.1-201ENST00000406535 843 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 RPS3AP3-201ENST00000411933 242 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC000089.1-201ENST00000424559 801 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 RIMKLBP2-201ENST00000424737 654 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC007365.2-201ENST00000428806 458 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 VDAC1P6-201ENST00000430062 855 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AL358934.1-201ENST00000432346 324 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 RPL12P11-201ENST00000439970 501 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 RPL38P1-201ENST00000460914 211 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC021660.1-201ENST00000465006 554 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 RPL35P6-201ENST00000490024 372 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 ST13P6-201ENST00000522430 1102 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AP003034.1-201ENST00000534621 422 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AL390334.1-201ENST00000556395 450 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC244034.2-201ENST00000562504 509 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 RPL12P25-202ENST00000598100 674 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AL162413.1-201ENST00000603198 110 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC091488.1-201ENST00000604239 660 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 CYP1D1P-201ENST00000416662 1433 ntBASIC9.79□□□□□ -0.84
PHF8Q9UPP1 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
PHF8Q9UPP1 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 EXOC7P1-201ENST00000509881 2059 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 RN7SKP189-201ENST00000365042 330 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 RPS3AP36-201ENST00000398190 775 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 HMGB3P18-201ENST00000406327 590 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 ZSCAN12P1-201ENST00000406489 419 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 RN7SKP254-201ENST00000410685 310 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AC109780.2-201ENST00000413467 845 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 TIMM8BP2-201ENST00000445940 251 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AL022237.1-201ENST00000446663 358 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 RPL23P10-201ENST00000468780 412 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AC096741.1-201ENST00000472250 846 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 UGT2A3P7-201ENST00000510485 734 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 RNU6-277P-201ENST00000516272 106 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AC239860.2-201ENST00000525886 270 ntBASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC9.78□□□□□ -0.84
PHF8Q9UPP1 BNIP3P23-201ENST00000599655 511 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms