Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS29Q9UBQ0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 RNA5SP223-201ENST00000365174 120 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 OR8V1P-201ENST00000395193 873 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AL358178.1-201ENST00000407698 397 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 RNA5SP178-201ENST00000410380 128 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 MGAT2P2-201ENST00000427194 797 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 BX842559.2-201ENST00000451418 605 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 MYL12BP2-201ENST00000503948 512 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC090568.1-201ENST00000509499 856 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 MTATP6P1-201ENST00000514057 681 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC100784.1-201ENST00000522790 310 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC106730.2-201ENST00000566641 540 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC127024.5-201ENST00000580085 462 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC002069.2-201ENST00000603580 883 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 SUGT1P3-202ENST00000604259 383 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 SAMMSON-209ENST00000641222 1100 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AP005435.3-201ENST00000531260 3198 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AC020633.1-201ENST00000468439 2247 ntBASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS29Q9UBQ0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC006484.1-201ENST00000435086 1884 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC104623.2-202ENST00000623477 4002 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AL133325.1-201ENST00000421090 382 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC046176.1-201ENST00000435260 1170 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AL161722.1-201ENST00000446972 1032 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AL133445.1-201ENST00000467051 452 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 RPL12P24-201ENST00000474907 486 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 RN7SL547P-201ENST00000490793 290 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 RNA5SP373-201ENST00000517271 95 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC019322.1-201ENST00000571869 389 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC008814.1-201ENST00000603797 406 ntBASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS29Q9UBQ0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 ADAM5-202ENST00000399789 1942 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 RNU1-146P-201ENST00000364015 165 ntBASIC5.02□□□□□ -1.61
VPS29Q9UBQ0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms