Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MTND2P8-201ENST00000450555 1025 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC124945.1-201ENST00000485133 188 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 WBP1LP3-201ENST00000523033 208 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC007494.1-201ENST00000562293 760 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 MIR4776-2-201ENST00000580204 80 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 BNIP3P32-201ENST00000600015 554 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AL451064.1-201ENST00000607718 471 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 MIR6768-201ENST00000610734 72 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC009464.1-201ENST00000615731 469 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 RNA5SP439-201ENST00000617595 124 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC138907.10-201ENST00000623708 983 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AC027088.4-201ENST00000611559 1947 ntBASIC6.03□□□□□ -1.44
DKK3Q9UBP4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
DKK3Q9UBP4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
DKK3Q9UBP4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.02□□□□□ -1.44
DKK3Q9UBP4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
DKK3Q9UBP4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
DKK3Q9UBP4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AL603750.1-201ENST00000624216 1717 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC092451.3-201ENST00000625067 1343 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 SELENOWP1-201ENST00000322792 252 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 RN7SKP128-201ENST00000364270 303 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AL589994.1-201ENST00000404962 340 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 TRIM60P17-201ENST00000415181 719 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AL035660.1-201ENST00000422041 222 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 CDY8P-201ENST00000428380 1279 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 NDUFS5P5-201ENST00000437256 321 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 MTND1P33-201ENST00000446251 917 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC099063.2-201ENST00000446360 662 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 CDY20P-201ENST00000447528 1279 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AP002345.1-201ENST00000456493 928 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 snoU13.29-201ENST00000459370 104 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC104164.1-201ENST00000460282 590 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC084754.1-201ENST00000463466 464 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 RN7SL177P-201ENST00000476596 299 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC104982.1-201ENST00000478775 574 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 OR9N1P-202ENST00000494289 481 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 RNU5A-7P-201ENST00000515979 116 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 EEF1A1P37-201ENST00000522748 715 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 OR4V1P-201ENST00000525394 1140 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 LRRC34P1-201ENST00000542742 915 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC084824.2-201ENST00000548906 345 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC068305.2-201ENST00000550567 1205 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC008521.2-201ENST00000591021 259 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AP002884.5-201ENST00000595053 1132 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC008536.1-201ENST00000602872 669 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC004890.3-201ENST00000605566 1095 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AC087683.2-201ENST00000611384 326 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 AL078595.3-201ENST00000623815 1166 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
DKK3Q9UBP4 MTCO1P15-201ENST00000529569 1526 ntBASIC6.02□□□□□ -1.45
DKK3Q9UBP4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms