Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 RN7SL727P-201ENST00000482164 296 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC008953.1-201ENST00000497334 318 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 SDR42E1P1-201ENST00000611327 477 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC016597.2-201ENST00000613256 341 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 U1.25-201ENST00000614085 162 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 U1.34-201ENST00000618578 162 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 U1.31-201ENST00000620022 160 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC009269.6-201ENST00000621778 588 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 AC015722.2-201ENST00000622210 551 ntBASIC6.36□□□□□ -1.39
COL20A1Q9P218 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
COL20A1Q9P218 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL20A1Q9P218 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL20A1Q9P218 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL20A1Q9P218 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 PABPC1P6-201ENST00000445594 1829 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC010132.2-201ENST00000295493 1043 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 RNU6-792P-201ENST00000363490 107 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 GNG5P2-201ENST00000372054 207 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 ATP5F1P6-201ENST00000402768 767 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 Z93019.1-201ENST00000416450 973 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 AL512637.2-201ENST00000431287 1256 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL20A1Q9P218 AL163193.1-201ENST00000444895 788 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC024558.1-201ENST00000505008 528 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 PGAM1P13-201ENST00000507497 754 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 NOP56P3-201ENST00000549457 385 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL20A1Q9P218 AF129408.1-201ENST00000608767 431 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC104763.3-201ENST00000613765 618 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 CASC19-264ENST00000641912 1184 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 AC073365.1-203ENST00000641055 1992 ntBASIC6.35□□□□□ -1.39
COL20A1Q9P218 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.35□□□□□ -1.39
COL20A1Q9P218 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL20A1Q9P218 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL20A1Q9P218 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL20A1Q9P218 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL20A1Q9P218 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL20A1Q9P218 RNU4-2-201ENST00000365668 141 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC005042.1-201ENST00000393397 800 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 RSL24D1P1-201ENST00000404972 493 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 RN7SKP279-201ENST00000411383 298 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC069282.1-201ENST00000411911 526 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 RPS26P38-201ENST00000414476 348 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC017078.1-201ENST00000416146 368 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 VN1R37P-201ENST00000419096 748 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC007161.1-204ENST00000423039 460 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 AL390879.1-201ENST00000439143 386 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 AL596266.1-201ENST00000448132 400 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 RN7SKP253-201ENST00000516424 309 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 AP001804.1-201ENST00000526868 919 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC126177.5-201ENST00000549599 178 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC051619.2-201ENST00000559063 397 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms