Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MRRFP1-201ENST00000435941 1675 ntBASIC6.48□□□□□ -1.37
HMG20BQ9P0W2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HMG20BQ9P0W2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.48□□□□□ -1.37
HMG20BQ9P0W2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 SNORA48.4-201ENST00000391089 134 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 AC017019.1-201ENST00000426129 261 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 AL136231.1-201ENST00000429407 730 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 AC090589.1-201ENST00000473109 362 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 RPS18P6-201ENST00000476880 458 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 RPL15P21-201ENST00000495592 567 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 RPS24P16-201ENST00000497294 392 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 SNRPCP2-201ENST00000504370 475 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 BX323046.1-201ENST00000610145 535 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 AC244107.2-201ENST00000611773 76 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 MIR7155-201ENST00000615925 56 ntBASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.47□□□□□ -1.37
HMG20BQ9P0W2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.46□□□□□ -1.37
HMG20BQ9P0W2 NLRP3P1-201ENST00000622303 1785 ntBASIC6.46□□□□□ -1.37
HMG20BQ9P0W2 AL360270.2-201ENST00000562952 5985 ntBASIC6.46□□□□□ -1.37
HMG20BQ9P0W2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
HMG20BQ9P0W2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 MIR765-201ENST00000390226 114 ntBASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 HCFC2P1-201ENST00000392864 1592 ntBASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 RPL23AP27-201ENST00000415161 451 ntBASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 RPL7AP49-201ENST00000429522 581 ntBASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 AL591438.1-201ENST00000433508 581 ntBASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 RPS11P7-201ENST00000442125 465 ntBASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 AC021193.1-201ENST00000511607 420 ntBASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 AC107993.1-201ENST00000591343 684 ntBASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 AL034549.2-201ENST00000618285 3373 ntBASIC6.46□□□□□ -1.38
HMG20BQ9P0W2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 RNA5SP507-201ENST00000363603 121 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 MIR105-1-201ENST00000385222 81 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 GAPDHP58-201ENST00000438477 1006 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 CBX1P2-201ENST00000453841 458 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 IGBP1P4-201ENST00000503202 879 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 HMGN1P9-201ENST00000515212 298 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC022832.1-201ENST00000530718 645 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC095055.1-201ENST00000603472 1113 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AL161912.3-201ENST00000605404 628 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC092944.2-201ENST00000605443 889 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 RPSAP73-201ENST00000614820 330 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AL353684.1-201ENST00000622677 1120 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 MTCO1P1-201ENST00000624263 1081 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AP003400.3-201ENST00000624904 346 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 AC099654.6-201ENST00000636487 512 ntBASIC6.45□□□□□ -1.38
HMG20BQ9P0W2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms