Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 AL034374.2-201ENST00000605281 548 ntBASIC5.72□□□□□ -1.49
NXF3Q9H4D5 uc_338.7-201ENST00000621834 124 ntBASIC5.72□□□□□ -1.49
NXF3Q9H4D5 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 PANDAR-201ENST00000629595 1506 ntBASIC5.72□□□□□ -1.49
NXF3Q9H4D5 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.72□□□□□ -1.49
NXF3Q9H4D5 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
NXF3Q9H4D5 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
NXF3Q9H4D5 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.71□□□□□ -1.49
NXF3Q9H4D5 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.71□□□□□ -1.49
NXF3Q9H4D5 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 RNA5SP305-201ENST00000362665 119 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 MIR600-201ENST00000385007 98 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AL589647.1-201ENST00000402485 466 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AL133482.1-201ENST00000415988 498 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 CEACAMP7-201ENST00000444105 496 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 RPL7P61-201ENST00000451721 751 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC079168.1-201ENST00000458741 345 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC093827.1-201ENST00000480094 861 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 HMGN1P9-201ENST00000515212 298 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 RN7SKP66-201ENST00000516681 231 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC013701.1-201ENST00000522657 465 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AP002373.2-201ENST00000541631 1060 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC092490.3-201ENST00000545370 572 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 MIR4433B-201ENST00000581329 102 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC133644.2-201ENST00000608142 540 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC099494.2-201ENST00000623371 978 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AP002799.1-201ENST00000623552 423 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AC005618.4-201ENST00000625053 554 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AL355488.2-201ENST00000609909 2850 ntBASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NXF3Q9H4D5 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AC012078.1-201ENST00000405035 1646 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 HSPA8P18-201ENST00000439846 1928 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AL034549.2-201ENST00000618285 3373 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AL121839.2-201ENST00000565058 6943 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 RNU4-4P-201ENST00000364588 130 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AL645733.1-201ENST00000402250 217 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 RN7SKP125-201ENST00000410481 302 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AC093162.1-201ENST00000419682 124 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 RPS27P18-201ENST00000431701 247 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 IGBP1P4-201ENST00000503202 879 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AP006245.2-201ENST00000522004 300 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AP002884.5-201ENST00000595053 1132 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AC008536.1-201ENST00000602872 669 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms