Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 RPL15P21-201ENST00000495592 567 ntBASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 AC093763.2-201ENST00000505334 1223 ntBASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 IMPA1P1-201ENST00000510718 842 ntBASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 NRBF2P4-201ENST00000520874 850 ntBASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 AL022394.1-201ENST00000606979 292 ntBASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.4□□□□□ -1.39
UPF3BQ9BZI7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
UPF3BQ9BZI7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
UPF3BQ9BZI7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
UPF3BQ9BZI7 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 AC006600.2-201ENST00000624834 2506 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 TNPO1P1-201ENST00000423641 1138 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 SRSF1P1-201ENST00000424058 520 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 AL390119.1-201ENST00000440329 312 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 AC090602.1-201ENST00000469695 252 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 AC058823.1-201ENST00000485315 474 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 AC027026.1-201ENST00000532323 742 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 AC078878.1-201ENST00000539832 958 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 AC004825.1-201ENST00000555068 586 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 AC090220.1-201ENST00000593078 1699 ntBASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.39□□□□□ -1.39
UPF3BQ9BZI7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 AP001284.1-201ENST00000528393 2118 ntBASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 RNA5SP234-201ENST00000363916 119 ntBASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 RNU4-2-201ENST00000365668 141 ntBASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 OR1L6-202ENST00000373684 1044 ntBASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 GSTM5P1-201ENST00000434751 660 ntBASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 RANP1-206ENST00000455094 651 ntBASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 AC104785.1-201ENST00000603220 588 ntBASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 AC009027.1-201ENST00000604510 479 ntBASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 AP003400.3-201ENST00000624904 346 ntBASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
UPF3BQ9BZI7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AC125336.1-201ENST00000508893 2827 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AC235565.1-201ENST00000456962 1325 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AL133388.1-201ENST00000404509 287 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 RPL12P9-201ENST00000412942 488 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 CYCSP51-201ENST00000443545 318 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AC016772.1-201ENST00000444170 1261 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 RPS12P31-201ENST00000491419 398 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 RN7SKP99-201ENST00000517028 307 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 RN7SL356P-201ENST00000582228 248 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms