Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 HMGB1P13-201ENST00000406019 642 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 USP24P1-201ENST00000433802 779 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 RPS3AP38-201ENST00000435889 763 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AL512593.1-201ENST00000444758 779 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 RN7SL836P-201ENST00000476140 296 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC005412.2-201ENST00000492004 341 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC026414.1-201ENST00000504046 698 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 CDH12P2-201ENST00000504393 298 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC020699.1-201ENST00000505161 445 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC112484.3-201ENST00000505910 329 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AL158068.1-201ENST00000506116 616 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 RN7SKP287-201ENST00000516546 266 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AP001207.2-201ENST00000519490 539 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC244502.2-201ENST00000543361 851 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AP002884.5-201ENST00000595053 1132 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 VN1R87P-201ENST00000596706 487 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC018618.2-201ENST00000604770 446 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC093424.1-201ENST00000604999 338 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AC004908.3-201ENST00000610248 625 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 uc_338.29-201ENST00000615099 168 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 uc_338.31-201ENST00000615595 186 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 AL031658.2-201ENST00000616850 651 ntBASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM54Q9BYV2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM54Q9BYV2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.9□□□□□ -1.47
TRIM54Q9BYV2 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.9□□□□□ -1.47
TRIM54Q9BYV2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.9□□□□□ -1.47
TRIM54Q9BYV2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
TRIM54Q9BYV2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM54Q9BYV2 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM54Q9BYV2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.9□□□□□ -1.47
TRIM54Q9BYV2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC018717.1-201ENST00000457712 1505 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 OR51B3P-201ENST00000412287 913 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 SSR1P2-201ENST00000415208 787 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 GAPDHP34-201ENST00000432112 823 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 FTLP8-201ENST00000446770 267 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 EIF2S2P2-201ENST00000447161 982 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 OSTCP1-201ENST00000455507 450 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 SNORD11.1-201ENST00000459482 85 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC021205.1-201ENST00000468797 348 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC092865.4-201ENST00000477936 615 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 TRBV5-2-201ENST00000489095 273 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 HIGD1AP18-201ENST00000520730 278 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC011611.5-201ENST00000552477 578 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms