Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 CYP4F27P-201ENST00000514557 494 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 SETP21-201ENST00000514799 892 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 RNU6-964P-201ENST00000516524 69 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC060775.1-201ENST00000518241 520 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC010306.1-201ENST00000523223 1117 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 TRIM77BP-201ENST00000524985 1119 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AL365181.4-201ENST00000609800 547 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 MIR6793-201ENST00000612376 63 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC006511.3-201ENST00000624929 1783 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 IMMTP1-201ENST00000435590 2219 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 Y_RNA.51-201ENST00000362725 102 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 RNA5SP375-201ENST00000362975 119 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 RNU6-40P-201ENST00000384254 107 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AP002784.2-201ENST00000397300 549 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 RN7SKP151-201ENST00000410230 316 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 RPS17P17-201ENST00000419392 409 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AC006994.1-201ENST00000438212 839 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 DNAJA1P5-201ENST00000440278 943 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AL512593.1-201ENST00000444758 779 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AL096829.2-201ENST00000446582 742 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 OR52J1P-201ENST00000450596 932 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AC023245.1-201ENST00000468501 517 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 NPM1P17-201ENST00000479221 602 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 RPL23AP40-201ENST00000487630 390 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AP005119.1-201ENST00000580956 292 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AL357562.1-201ENST00000624911 609 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AP000432.2-201ENST00000624164 2048 ntBASIC6.32□□□□□ -1.4
CDK5RAP1Q96SZ6 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 RNU6-623P-201ENST00000363143 105 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 RAP1BP3-201ENST00000407180 549 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 NACAP7-201ENST00000407371 609 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 RN7SKP166-201ENST00000410812 305 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 HMGN1P20-201ENST00000411849 300 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC116036.1-201ENST00000412199 367 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms