Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf72Q96LT7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf72Q96LT7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf72Q96LT7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf72Q96LT7 CR788268.1-201ENST00000603931 1809 ntBASIC5.51□□□□□ -1.53
C9orf72Q96LT7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 SNORA48.4-201ENST00000391089 134 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 COX5BP7-201ENST00000414780 274 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 OR6D1P-201ENST00000436165 939 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 RN7SL629P-201ENST00000489622 285 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 NRBF2P4-201ENST00000520874 850 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AC040958.1-201ENST00000561102 201 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AC127024.5-201ENST00000580085 462 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AC079395.2-201ENST00000610982 737 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 TRIM51GP-201ENST00000534741 1350 ntBASIC5.5□□□□□ -1.53
C9orf72Q96LT7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf72Q96LT7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AC004817.4-201ENST00000602396 3625 ntBASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AC079298.1-201ENST00000625026 1619 ntBASIC5.49□□□□□ -1.53
C9orf72Q96LT7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 LDHBP2-201ENST00000456969 1005 ntBASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AC090589.1-201ENST00000473109 362 ntBASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AC108693.1-201ENST00000496068 432 ntBASIC5.49□□□□□ -1.53
C9orf72Q96LT7 SUMO2P4-201ENST00000504193 276 ntBASIC5.49□□□□□ -1.53
C9orf72Q96LT7 ENPP7P11-201ENST00000505915 627 ntBASIC5.49□□□□□ -1.53
C9orf72Q96LT7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 RBM22P12-201ENST00000567098 1255 ntBASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AC007448.1-201ENST00000582714 234 ntBASIC5.49□□□□□ -1.53
C9orf72Q96LT7 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf72Q96LT7 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.48□□□□□ -1.53
C9orf72Q96LT7 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.48□□□□□ -1.53
C9orf72Q96LT7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms