Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 MIR4732-201ENST00000581873 76 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 MIR4503-201ENST00000582187 83 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AL009028.1-201ENST00000604895 802 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AC107075.1-201ENST00000613695 314 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AL132822.1-201ENST00000617063 513 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 MRPL57P3-201ENST00000619218 176 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 7SK.10-201ENST00000621414 298 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 AC135068.5-201ENST00000624197 983 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.2□□□□□ -1.1
TRIM47Q96LD4 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRIM47Q96LD4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC217777.1-201ENST00000570034 1471 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC010894.1-201ENST00000313760 361 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 NACA3P-201ENST00000359690 648 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 RNA5SP232-201ENST00000364144 119 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 RNU4-91P-201ENST00000364778 135 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 Y_RNA.372-201ENST00000365599 102 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 SNORA75.4-201ENST00000391278 119 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 RPS7P8-201ENST00000418311 581 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AL593856.1-201ENST00000419949 805 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC018630.2-202ENST00000422992 927 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 TCEA1P3-201ENST00000443005 880 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 RPL36AP33-201ENST00000450395 310 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC098824.1-201ENST00000453565 980 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 RPS27AP2-201ENST00000457576 465 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 RNA5SP269-201ENST00000459032 137 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 RPS14P7-201ENST00000473701 448 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC106822.1-201ENST00000502647 526 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC093878.1-201ENST00000515630 432 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC023632.1-201ENST00000518463 375 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 NOP56P3-201ENST00000549457 385 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 ARL2BPP2-201ENST00000550907 489 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 MT1CP-201ENST00000567054 174 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC034268.2-201ENST00000571784 482 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 MIR3154-201ENST00000577829 84 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC006116.10-201ENST00000591836 581 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 PRR13P5-201ENST00000596581 442 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AL355802.3-201ENST00000607571 545 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AP001521.2-201ENST00000608772 546 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AL121809.2-201ENST00000613169 341 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC026951.2-201ENST00000613847 241 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AC023632.6-201ENST00000624338 2177 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 AL359715.4-201ENST00000606629 1436 ntBASIC8.19□□□□□ -1.1
TRIM47Q96LD4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.19□□□□□ -1.1
TRIM47Q96LD4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 ZNF519P1-201ENST00000449011 1626 ntBASIC8.18□□□□□ -1.1
TRIM47Q96LD4 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
TRIM47Q96LD4 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms