Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 RBBP4P1-201ENST00000502424 1276 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 HMGB1P3-201ENST00000502802 616 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC108471.1-201ENST00000513977 287 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 RN7SKP35-201ENST00000517210 151 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AP003396.4-201ENST00000527574 265 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC024405.1-201ENST00000532521 1042 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC006512.2-201ENST00000543250 486 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC068305.2-201ENST00000550567 1205 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AL390334.1-201ENST00000556395 450 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC068714.1-201ENST00000559623 800 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AP005262.1-201ENST00000582646 997 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AL139099.4-201ENST00000614802 114 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 AL136228.1-201ENST00000622221 319 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AL078621.3-201ENST00000623707 2042 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTP4A1Q93096 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTP4A1Q93096 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 QRSL1P1-201ENST00000400977 1540 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.17□□□□□ -1.58
PTP4A1Q93096 AC008627.1-201ENST00000517511 1704 ntBASIC5.17□□□□□ -1.58
PTP4A1Q93096 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTP4A1Q93096 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 NPM1P10-201ENST00000398310 865 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 OR10T1P-201ENST00000424327 947 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC007679.3-201ENST00000434035 414 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC092013.1-201ENST00000438795 332 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC023271.1-201ENST00000445936 1090 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC005077.1-201ENST00000449226 375 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 PPIAP27-201ENST00000453800 265 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 RPA2P1-201ENST00000556557 721 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC005244.1-201ENST00000582566 339 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC090236.2-201ENST00000587933 1101 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AL049844.2-201ENST00000604280 628 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 AL353729.2-201ENST00000605859 1249 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC004801.6-201ENST00000616571 978 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.16□□□□□ -1.58
PTP4A1Q93096 AC104964.3-201ENST00000606115 2860 ntBASIC5.16□□□□□ -1.58
PTP4A1Q93096 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTP4A1Q93096 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTP4A1Q93096 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
PTP4A1Q93096 GVINP1-202ENST00000531871 7271 ntBASIC5.15□□□□□ -1.58
PTP4A1Q93096 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTP4A1Q93096 PHKBP1-201ENST00000450951 1951 ntBASIC5.15□□□□□ -1.58
PTP4A1Q93096 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTP4A1Q93096 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.15□□□□□ -1.58
PTP4A1Q93096 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTP4A1Q93096 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTP4A1Q93096 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PTP4A1Q93096 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC096921.1-201ENST00000411661 375 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC099336.2-201ENST00000422457 254 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 NPM1P22-201ENST00000427761 952 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 AC069154.1-201ENST00000432914 542 ntBASIC5.15□□□□□ -1.59
PTP4A1Q93096 DEFA9P-201ENST00000433042 285 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms