Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC015982.1-201ENST00000608113 465 ntBASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 AC109583.2-201ENST00000617367 129 ntBASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 AP001962.1-201ENST00000624114 559 ntBASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 AC099654.6-201ENST00000636487 512 ntBASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 AC083843.2-201ENST00000568248 6253 ntBASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RTN4IP1Q8WWV3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 CTSL3P-202ENST00000412179 788 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AL596448.1-201ENST00000415024 392 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC124944.2-201ENST00000429866 1242 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 HMGN1P36-201ENST00000446623 298 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC090568.1-201ENST00000509499 856 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 OR8A2P-201ENST00000528631 952 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC090888.3-201ENST00000558917 509 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AP005403.1-201ENST00000579720 229 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 MIR4505-201ENST00000582238 73 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC012616.1-201ENST00000600294 197 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AP000769.2-201ENST00000602344 396 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 MIR6839-201ENST00000620425 113 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 CU639417.4-201ENST00000623928 207 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 RNF19BPY-201ENST00000458209 1550 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 THAP12P5-201ENST00000405864 2275 ntBASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
RTN4IP1Q8WWV3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.46□□□□□ -1.69
RTN4IP1Q8WWV3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RTN4IP1Q8WWV3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.46□□□□□ -1.69
RTN4IP1Q8WWV3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.46□□□□□ -1.69
RTN4IP1Q8WWV3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.46□□□□□ -1.69
RTN4IP1Q8WWV3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 OR4G1P-202ENST00000641173 1788 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 RN7SKP28-201ENST00000364770 305 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 RN7SKP153-201ENST00000365026 316 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 RNU4-2-201ENST00000365668 141 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 OR6E1P-201ENST00000414424 923 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 VN1R3-201ENST00000418822 919 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 TNPO1P1-201ENST00000423641 1138 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms