Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 MIR600-201ENST00000385007 98 ntBASIC6.37□□□□□ -1.39
SNED1Q8TER0 GAPDHP15-201ENST00000398586 975 ntBASIC6.37□□□□□ -1.39
SNED1Q8TER0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 RPL34P27-201ENST00000428810 349 ntBASIC6.37□□□□□ -1.39
SNED1Q8TER0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 snoU13.29-201ENST00000459370 104 ntBASIC6.37□□□□□ -1.39
SNED1Q8TER0 RN7SL188P-201ENST00000469842 285 ntBASIC6.37□□□□□ -1.39
SNED1Q8TER0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 MRPS33P2-201ENST00000507850 322 ntBASIC6.37□□□□□ -1.39
SNED1Q8TER0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 OR4A43P-201ENST00000532938 908 ntBASIC6.37□□□□□ -1.39
SNED1Q8TER0 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 AC244107.2-201ENST00000611773 76 ntBASIC6.37□□□□□ -1.39
SNED1Q8TER0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 AC104964.3-201ENST00000606115 2860 ntBASIC6.37□□□□□ -1.39
SNED1Q8TER0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SNED1Q8TER0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SNED1Q8TER0 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNED1Q8TER0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNED1Q8TER0 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 AP002530.1-201ENST00000405705 684 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 AC119751.6-201ENST00000416712 186 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 AC004074.1-201ENST00000421810 1063 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 AC007559.1-201ENST00000428736 355 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 RN7SL385P-201ENST00000468873 276 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 RN7SL481P-201ENST00000477764 299 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 STRADBP1-201ENST00000478954 1281 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 RN7SL690P-201ENST00000582087 240 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 MIR6758-201ENST00000620653 63 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNED1Q8TER0 AC093829.1-201ENST00000506662 1618 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNED1Q8TER0 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNED1Q8TER0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 AC138907.8-201ENST00000623981 2256 ntBASIC6.36□□□□□ -1.39
SNED1Q8TER0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SNED1Q8TER0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNED1Q8TER0 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SNED1Q8TER0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.36□□□□□ -1.39
SNED1Q8TER0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNED1Q8TER0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNED1Q8TER0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 RNA5SP90-201ENST00000364801 99 ntBASIC6.35□□□□□ -1.39
SNED1Q8TER0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNED1Q8TER0 RN7SKP114-201ENST00000410327 279 ntBASIC6.35□□□□□ -1.39
SNED1Q8TER0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNED1Q8TER0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 HSPD1P12-201ENST00000429127 1069 ntBASIC6.35□□□□□ -1.39
SNED1Q8TER0 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 RBMY2TP-201ENST00000451162 947 ntBASIC6.35□□□□□ -1.39
SNED1Q8TER0 MTND2P7-201ENST00000521337 640 ntBASIC6.35□□□□□ -1.39
SNED1Q8TER0 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 AC091042.1-201ENST00000579213 173 ntBASIC6.35□□□□□ -1.39
SNED1Q8TER0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 AP003400.3-201ENST00000624904 346 ntBASIC6.35□□□□□ -1.39
SNED1Q8TER0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 AL359715.3-201ENST00000569267 2123 ntBASIC6.35□□□□□ -1.39
SNED1Q8TER0 SDAD1P1-202ENST00000524156 2051 ntBASIC6.35□□□□□ -1.39
SNED1Q8TER0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNED1Q8TER0 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNED1Q8TER0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNED1Q8TER0 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
SNED1Q8TER0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms