Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 USP9YP34-201ENST00000453983 808 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC023245.1-201ENST00000468501 517 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 RPS27P20-201ENST00000492051 246 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 HMGN1P16-201ENST00000508308 283 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 HMGB3P13-201ENST00000511263 607 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 RNA5SP303-201ENST00000516192 130 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC135983.3-201ENST00000528049 1226 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC087575.1-201ENST00000585087 229 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AL117336.2-201ENST00000602435 335 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 MTCO3P22-201ENST00000603219 784 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AL499605.1-201ENST00000604628 403 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC087045.1-201ENST00000605856 382 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC026951.2-201ENST00000613847 241 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 DUXAP9-208ENST00000622815 614 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC073593.1-201ENST00000624500 411 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC068733.2-201ENST00000605434 1418 ntBASIC7□□□□□ -1.29
SHKBP1Q8TBC3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SHKBP1Q8TBC3 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC104837.1-201ENST00000444644 1587 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 TATDN2P3-201ENST00000452855 3665 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC092326.2-201ENST00000624772 1561 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 MTND5P11-201ENST00000511037 1812 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 PABPC1P8-201ENST00000452851 2086 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 RPL12P13-201ENST00000310055 497 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 RNU4-21P-201ENST00000362802 126 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 SNORD35A-201ENST00000363389 86 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 SNORD56.4-201ENST00000363883 71 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 RNU6-413P-201ENST00000384115 107 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 SNORA75-201ENST00000384158 137 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 RNU6-1005P-201ENST00000384519 107 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 MIR199B-201ENST00000384849 110 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 PRELID1P1-201ENST00000403549 660 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 MIR1277-201ENST00000408536 78 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 PMS2P9-201ENST00000441237 515 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 GAPDHP33-201ENST00000443168 1013 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 RPL12P7-201ENST00000493832 494 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC108941.1-201ENST00000502853 530 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC122718.2-201ENST00000505325 591 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 HIGD1AP18-201ENST00000520730 278 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 EIF5A2P1-201ENST00000564027 460 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC012414.6-201ENST00000568241 401 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 RN7SL230P-201ENST00000580835 303 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 RN7SL622P-201ENST00000585292 275 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AC004948.1-201ENST00000609858 672 ntBASIC6.99□□□□□ -1.29
SHKBP1Q8TBC3 AL139418.1-201ENST00000613613 177 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms