Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VPS8Q8N3P4 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AC092647.3-201ENST00000443044 633 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 OR7E125P-201ENST00000443450 846 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 RN7SKP260-201ENST00000516907 149 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AC011840.5-201ENST00000582125 771 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AC112255.1-201ENST00000624070 2493 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 SAMM50P1-201ENST00000455403 1399 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 CASC19-221ENST00000641309 1382 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 SMG1P7-201ENST00000565246 2704 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 INTS6P1-201ENST00000504674 2530 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AC053481.2-202ENST00000582394 1500 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 VN1R54P-201ENST00000435210 1049 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 RPL7P11-201ENST00000437586 658 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 HMGN2P25-201ENST00000486956 268 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AC010350.1-201ENST00000504908 231 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 MIR4700-201ENST00000578311 74 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AC092944.2-201ENST00000605443 889 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 AC090510.2-201ENST00000617465 629 ntBASIC8.03□□□□□ -1.12
VPS8Q8N3P4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VPS8Q8N3P4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
VPS8Q8N3P4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC8.02□□□□□ -1.12
VPS8Q8N3P4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 ADAM24P-201ENST00000398655 2101 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 RNA5SP455-201ENST00000365190 119 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AL353625.1-202ENST00000366273 571 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AL645733.1-201ENST00000402250 217 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AL390316.1-201ENST00000406279 553 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AL354766.1-201ENST00000423396 542 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AC002075.1-201ENST00000457396 676 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 RN7SL441P-201ENST00000492388 296 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AC097486.1-201ENST00000515331 210 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AC005377.1-201ENST00000605126 456 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 RNA5SP439-201ENST00000617595 124 ntBASIC8.02□□□□□ -1.13
VPS8Q8N3P4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS8Q8N3P4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 ABCC13-202ENST00000463099 3842 ntBASIC8.01□□□□□ -1.13
VPS8Q8N3P4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 RN7SKP113-201ENST00000363891 295 ntBASIC8.01□□□□□ -1.13
VPS8Q8N3P4 ATP5HP3-201ENST00000396994 486 ntBASIC8.01□□□□□ -1.13
VPS8Q8N3P4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 MIR4436B2-201ENST00000581415 91 ntBASIC8.01□□□□□ -1.13
VPS8Q8N3P4 MIR4436B1-201ENST00000583272 91 ntBASIC8.01□□□□□ -1.13
VPS8Q8N3P4 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 MIR6730-201ENST00000622213 67 ntBASIC8.01□□□□□ -1.13
VPS8Q8N3P4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 AC239868.2-201ENST00000564237 4527 ntBASIC8.01□□□□□ -1.13
VPS8Q8N3P4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS8Q8N3P4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC8□□□□□ -1.13
VPS8Q8N3P4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
VPS8Q8N3P4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC8□□□□□ -1.13
VPS8Q8N3P4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms