Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 RPL19P16-201ENST00000433839 588 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 RPL12P11-201ENST00000439970 501 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 SETP20-201ENST00000457046 852 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AC023141.9-201ENST00000458734 412 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 RPS4XP12-201ENST00000461747 709 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AC022133.1-201ENST00000490961 571 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AC022360.1-201ENST00000521058 340 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AP000859.1-201ENST00000525536 307 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AL390334.1-201ENST00000556395 450 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 RN7SL290P-201ENST00000578661 300 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AL589674.2-201ENST00000604304 337 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AC004477.3-201ENST00000614061 590 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AL512356.3-201ENST00000623005 461 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AC083843.2-201ENST00000568248 6253 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 RNA5SP335-201ENST00000363817 110 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 DSTNP5-201ENST00000427921 523 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC124944.2-201ENST00000429866 1242 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC090018.1-201ENST00000434369 367 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC090804.1-201ENST00000448870 490 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 CBX1P2-201ENST00000453841 458 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 RPL7P45-201ENST00000455851 743 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 RPL5P22-201ENST00000480199 884 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 RN7SL423P-201ENST00000486202 304 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 RPL7P51-201ENST00000490532 749 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 RPS12P31-201ENST00000491419 398 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 RN7SL447P-201ENST00000494711 245 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC138832.1-201ENST00000522871 556 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 HMGB1P40-201ENST00000525121 540 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 SNORD95-201ENST00000579879 68 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 SUGT1P3-202ENST00000604259 383 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 AC005252.1-201ENST00000604518 1063 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 DDX18P6-201ENST00000450119 1997 ntBASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC65Q8IXS2 SOCS5P3-201ENST00000425115 1576 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 MIR323A-201ENST00000362199 86 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 RNA5SP242-201ENST00000364171 118 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms