Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 PRMT5P1-201ENST00000514351 598 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 HSD3BP3-201ENST00000514706 994 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 MTND1P36-201ENST00000522384 936 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC027369.2-201ENST00000528030 440 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AL121594.2-201ENST00000541658 472 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC005034.4-201ENST00000603612 899 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC145423.1-201ENST00000605712 336 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 MIR6809-201ENST00000612189 116 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AL163051.2-201ENST00000618976 735 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC048341.3-201ENST00000619323 491 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC021766.1-201ENST00000624404 741 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 PWAR1-201ENST00000624188 2414 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC107027.3-201ENST00000565095 3473 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 QRSL1P1-201ENST00000400977 1540 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 METTL21EP-201ENST00000298105 713 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 RPL11P3-201ENST00000395256 523 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AP000357.1-201ENST00000409926 1165 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AL606495.1-201ENST00000422100 813 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AP000949.1-201ENST00000438328 629 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC243772.1-201ENST00000451620 410 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 GEMIN2P1-201ENST00000454246 752 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 HMGB1P4-201ENST00000455362 567 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC093166.4-201ENST00000457867 318 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 RN7SL205P-201ENST00000490174 284 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 RPS27AP16-201ENST00000492222 470 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 RNA5SP340-201ENST00000517132 107 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 IGKV2-19-201ENST00000518132 283 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 CIR1P1-201ENST00000524055 1133 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 MIR4776-2-201ENST00000580204 80 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC005244.1-201ENST00000582566 339 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC011374.2-201ENST00000607135 526 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AL391834.1-201ENST00000609609 560 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC092574.1-201ENST00000609771 420 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 AC096656.1-201ENST00000623826 1364 ntBASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.12□□□□□ -1.59
LINC00346Q8IVM7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms