Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU1-130P-201ENST00000363930 160 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 RNU1-85P-201ENST00000364127 164 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 RNA5SP317-201ENST00000410176 116 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 RNA5SP311-201ENST00000411290 116 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 CYCSP11-201ENST00000436426 315 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 RNA5SP315-201ENST00000516340 116 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 RNA5SP312-201ENST00000517068 116 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 AL121834.1-201ENST00000572284 509 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 CAST-222ENST00000508579 1758 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 RPS26P38-201ENST00000414476 348 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 BX510359.2-201ENST00000417920 305 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 RPS27AP12-201ENST00000429552 465 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 CBX1P1-201ENST00000440184 427 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 AC010326.1-201ENST00000462726 602 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 RPL7P19-201ENST00000469948 618 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 SEPT10P1-201ENST00000517342 1162 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 NMNAT1P1-201ENST00000554095 876 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS13CQ709C8 AC115286.1-201ENST00000604298 434 ntBASIC4.11□□□□□ -1.75
VPS13CQ709C8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS13CQ709C8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 RPS17P17-201ENST00000419392 409 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 OR7E125P-201ENST00000443450 846 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 ARL2BPP10-201ENST00000446487 531 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC007224.1-201ENST00000564410 144 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 AL121890.3-201ENST00000618494 516 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 RPL7P40-201ENST00000481703 745 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 GLUD1P3-202ENST00000508551 200 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 RN7SKP260-201ENST00000516907 149 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC023575.1-201ENST00000580510 358 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC004076.2-201ENST00000620532 3323 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 RPS3AP54-201ENST00000435535 734 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC073143.1-201ENST00000436316 395 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC114755.5-201ENST00000447760 831 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 RPL7P32-201ENST00000457119 744 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VPS13CQ709C8 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS13CQ709C8 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS13CQ709C8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS13CQ709C8 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
VPS13CQ709C8 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS13CQ709C8 AL445189.1-201ENST00000405722 338 ntBASIC4.09□□□□□ -1.75
VPS13CQ709C8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS13CQ709C8 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS13CQ709C8 AC090948.1-201ENST00000607464 549 ntBASIC4.09□□□□□ -1.75
VPS13CQ709C8 AL035461.2-201ENST00000619201 524 ntBASIC4.09□□□□□ -1.75
VPS13CQ709C8 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS13CQ709C8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS13CQ709C8 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
VPS13CQ709C8 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS13CQ709C8 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS13CQ709C8 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms