Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 AC063943.1-201ENST00000465434 453 ntBASIC5.17□□□□□ -1.58
RIF1Q5UIP0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC099654.2-201ENST00000433031 1980 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC005725.1-201ENST00000577346 2607 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 SNORA70C-201ENST00000384538 135 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 EI24P4-201ENST00000423683 1078 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AP001324.1-201ENST00000428553 399 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AL451063.1-201ENST00000450164 1133 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 HMGN2P25-201ENST00000486956 268 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AK3P4-201ENST00000504283 583 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC067959.1-201ENST00000604334 379 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC092692.1-201ENST00000623625 2595 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 SNORA71.3-201ENST00000362582 128 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 Y_RNA.333-201ENST00000365274 102 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC008280.1-201ENST00000418851 412 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 VN1R21P-201ENST00000426703 765 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC020593.1-201ENST00000507399 299 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC006115.2-201ENST00000596823 202 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.16□□□□□ -1.58
RIF1Q5UIP0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.16□□□□□ -1.58
RIF1Q5UIP0 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.15□□□□□ -1.58
RIF1Q5UIP0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 MIR4298-201ENST00000584380 73 ntBASIC5.15□□□□□ -1.58
RIF1Q5UIP0 AC245389.1-201ENST00000605141 529 ntBASIC5.15□□□□□ -1.58
RIF1Q5UIP0 AL445567.2-201ENST00000618935 498 ntBASIC5.15□□□□□ -1.58
RIF1Q5UIP0 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 RNA5SP196-201ENST00000625967 102 ntBASIC5.15□□□□□ -1.58
RIF1Q5UIP0 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
RIF1Q5UIP0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
RIF1Q5UIP0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RIF1Q5UIP0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
RIF1Q5UIP0 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC5.15□□□□□ -1.59
RIF1Q5UIP0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.15□□□□□ -1.59
RIF1Q5UIP0 AL353748.1-201ENST00000440753 474 ntBASIC5.15□□□□□ -1.59
RIF1Q5UIP0 AL022319.1-201ENST00000458183 1167 ntBASIC5.15□□□□□ -1.59
RIF1Q5UIP0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RIF1Q5UIP0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.15□□□□□ -1.59
RIF1Q5UIP0 OR4H6P-201ENST00000563771 921 ntBASIC5.15□□□□□ -1.59
RIF1Q5UIP0 AP005403.1-201ENST00000579720 229 ntBASIC5.15□□□□□ -1.59
RIF1Q5UIP0 AP000769.2-201ENST00000602344 396 ntBASIC5.15□□□□□ -1.59
RIF1Q5UIP0 AC004232.3-201ENST00000622977 525 ntBASIC5.15□□□□□ -1.59
RIF1Q5UIP0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms