Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
RFX7Q2KHR2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 RN7SKP104-201ENST00000362605 328 ntBASIC6.41□□□□□ -1.38
RFX7Q2KHR2 RNA5SP305-201ENST00000362665 119 ntBASIC6.41□□□□□ -1.38
RFX7Q2KHR2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 MIR589-201ENST00000385238 99 ntBASIC6.41□□□□□ -1.38
RFX7Q2KHR2 MIR550A3-201ENST00000390735 95 ntBASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AL589647.1-201ENST00000402485 466 ntBASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 VN1R54P-201ENST00000435210 1049 ntBASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 RPL7P41-201ENST00000485823 957 ntBASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AC006427.1-201ENST00000514359 712 ntBASIC6.41□□□□□ -1.38
RFX7Q2KHR2 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 OR1F2P-201ENST00000570470 933 ntBASIC6.41□□□□□ -1.38
RFX7Q2KHR2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AP005131.7-201ENST00000610087 611 ntBASIC6.41□□□□□ -1.38
RFX7Q2KHR2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RFX7Q2KHR2 AL353796.1-201ENST00000561542 3241 ntBASIC6.4□□□□□ -1.38
RFX7Q2KHR2 PANDAR-201ENST00000629595 1506 ntBASIC6.4□□□□□ -1.38
RFX7Q2KHR2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFX7Q2KHR2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.4□□□□□ -1.38
RFX7Q2KHR2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.4□□□□□ -1.38
RFX7Q2KHR2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
RFX7Q2KHR2 NCOA4P2-201ENST00000340589 1813 ntBASIC6.4□□□□□ -1.38
RFX7Q2KHR2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFX7Q2KHR2 BCORP1-203ENST00000513194 5093 ntBASIC6.4□□□□□ -1.38
RFX7Q2KHR2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 AL590762.4-201ENST00000425885 253 ntBASIC6.4□□□□□ -1.39
RFX7Q2KHR2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 HIGD1AP8-201ENST00000453927 274 ntBASIC6.4□□□□□ -1.39
RFX7Q2KHR2 RPS18P6-201ENST00000476880 458 ntBASIC6.4□□□□□ -1.39
RFX7Q2KHR2 AC022133.1-201ENST00000490961 571 ntBASIC6.4□□□□□ -1.39
RFX7Q2KHR2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 AC147055.3-201ENST00000510547 851 ntBASIC6.4□□□□□ -1.39
RFX7Q2KHR2 AC013701.1-201ENST00000522657 465 ntBASIC6.4□□□□□ -1.39
RFX7Q2KHR2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 AC027369.5-201ENST00000533838 755 ntBASIC6.4□□□□□ -1.39
RFX7Q2KHR2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 SETP3-201ENST00000581726 813 ntBASIC6.4□□□□□ -1.39
RFX7Q2KHR2 AC095055.1-201ENST00000603472 1113 ntBASIC6.4□□□□□ -1.39
RFX7Q2KHR2 AC074101.1-201ENST00000637861 241 ntBASIC6.4□□□□□ -1.39
RFX7Q2KHR2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
RFX7Q2KHR2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 U3.3-201ENST00000362986 216 ntBASIC6.39□□□□□ -1.39
RFX7Q2KHR2 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 AL645733.1-201ENST00000402250 217 ntBASIC6.39□□□□□ -1.39
RFX7Q2KHR2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 AC079809.1-201ENST00000415468 276 ntBASIC6.39□□□□□ -1.39
RFX7Q2KHR2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 EI24P4-201ENST00000423683 1078 ntBASIC6.39□□□□□ -1.39
RFX7Q2KHR2 NIPA2P1-201ENST00000426223 976 ntBASIC6.39□□□□□ -1.39
RFX7Q2KHR2 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms