Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC124947.2-202ENST00000552735 133 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH1Q08174 ACTG1P15-201ENST00000570019 1063 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 SNORA70D-201ENST00000578836 135 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AL390838.2-201ENST00000602394 274 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDH1Q08174 Y_RNA.804-201ENST00000615262 101 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AC012150.2-201ENST00000621300 544 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH1Q08174 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH1Q08174 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH1Q08174 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 MTCO1P23-201ENST00000415223 1526 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
PCDH1Q08174 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 HSPD1P9-201ENST00000420325 1636 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PCDH1Q08174 MIR301B-201ENST00000390813 78 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AL050335.1-201ENST00000396909 869 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 MIR1277-201ENST00000408536 78 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 OR51A5P-201ENST00000415429 942 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 PPIL1P1-201ENST00000423936 499 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 DUTP4-201ENST00000424782 475 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 RWDD4P2-201ENST00000426392 563 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 MTND1P14-201ENST00000427400 950 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDH1Q08174 AL645936.2-201ENST00000430565 928 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 RPSAP40-201ENST00000442343 891 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 SDHCP3-201ENST00000445371 506 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AL354685.2-201ENST00000448218 1447 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDH1Q08174 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDH1Q08174 AC114755.1-201ENST00000453101 868 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 RPLP0P1-201ENST00000457002 361 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 MTND6P6-201ENST00000478031 263 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDH1Q08174 RNA5SP518-201ENST00000515957 119 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDH1Q08174 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDH1Q08174 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDH1Q08174 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.8□□□□□ -1.32
PCDH1Q08174 AP001803.1-201ENST00000525668 147 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDH1Q08174 GLYATL1P4-201ENST00000529326 906 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDH1Q08174 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDH1Q08174 AL591767.3-201ENST00000554632 525 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDH1Q08174 MIR548AB-201ENST00000584917 84 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 SEPT7P9-203ENST00000604116 343 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AC024560.3-201ENST00000608482 349 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AC092954.2-201ENST00000609103 430 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDH1Q08174 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AC004836.1-201ENST00000623032 634 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDH1Q08174 U6.107-201ENST00000637108 79 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.8□□□□□ -1.32
PCDH1Q08174 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDH1Q08174 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.8□□□□□ -1.32
PCDH1Q08174 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDH1Q08174 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDH1Q08174 AC022507.1-201ENST00000548349 1505 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.8□□□□□ -1.32
PCDH1Q08174 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH1Q08174 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDH1Q08174 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
PCDH1Q08174 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDH1Q08174 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms