Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AL512637.1-201ENST00000439523 1231 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 RPS26P2-201ENST00000440331 348 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 AC064862.5-201ENST00000440618 334 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 ARL4AP3-201ENST00000441452 574 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 PCNPP2-201ENST00000441651 455 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.37□□□□□ -1.71
SSBP1Q04837 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSBP1Q04837 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.37□□□□□ -1.71
SSBP1Q04837 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.37□□□□□ -1.71
SSBP1Q04837 AC108751.2-201ENST00000469993 231 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
SSBP1Q04837 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.37□□□□□ -1.71
SSBP1Q04837 Y_RNA.667-201ENST00000516212 107 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 RNA5SP438-201ENST00000516561 112 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 HMGB1P19-201ENST00000517578 577 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.37□□□□□ -1.71
SSBP1Q04837 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.37□□□□□ -1.71
SSBP1Q04837 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SSBP1Q04837 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.37□□□□□ -1.71
SSBP1Q04837 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.37□□□□□ -1.71
SSBP1Q04837 RBM22P12-201ENST00000567098 1255 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 CYCSP40-201ENST00000575927 294 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 AC083964.1-201ENST00000607549 630 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.37□□□□□ -1.71
SSBP1Q04837 AL139407.1-201ENST00000613826 1175 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.37□□□□□ -1.71
SSBP1Q04837 AL596275.2-207ENST00000641188 675 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 AL596275.2-204ENST00000641628 552 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 AL596275.2-206ENST00000641957 626 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSBP1Q04837 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSBP1Q04837 AC068870.3-201ENST00000625077 2536 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC4.37□□□□□ -1.71
SSBP1Q04837 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSBP1Q04837 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSBP1Q04837 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SSBP1Q04837 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SSBP1Q04837 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSBP1Q04837 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SSBP1Q04837 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.37□□□□□ -1.71
SSBP1Q04837 AC104966.1-201ENST00000467010 1464 ntBASIC4.37□□□□□ -1.71
SSBP1Q04837 AL353796.1-201ENST00000561542 3241 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP1Q04837 AL034370.1-201ENST00000397254 1590 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 NEAT1-202ENST00000501122 22743 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SSBP1Q04837 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP1Q04837 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP1Q04837 SCARNA15-201ENST00000607520 4325 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSBP1Q04837 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP1Q04837 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP1Q04837 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP1Q04837 AL512422.1-201ENST00000407033 553 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.36□□□□□ -1.71
SSBP1Q04837 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP1Q04837 RPS11P7-201ENST00000442125 465 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.36□□□□□ -1.71
SSBP1Q04837 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP1Q04837 LRRC37A14P-201ENST00000452297 462 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.36□□□□□ -1.71
SSBP1Q04837 AP002884.1-201ENST00000479691 655 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.36□□□□□ -1.71
SSBP1Q04837 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP1Q04837 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.36□□□□□ -1.71
SSBP1Q04837 AC078878.1-201ENST00000539832 958 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP1Q04837 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 AC015802.2-201ENST00000589690 189 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 BNIP3P35-201ENST00000604530 490 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 AC129778.1-202ENST00000623812 261 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 AL591379.1-207ENST00000635982 261 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.36□□□□□ -1.71
SSBP1Q04837 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSBP1Q04837 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SSBP1Q04837 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SSBP1Q04837 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP1Q04837 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSBP1Q04837 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SSBP1Q04837 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.35□□□□□ -1.71
SSBP1Q04837 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP1Q04837 RNA5SP477-201ENST00000362639 119 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 RNU1-146P-201ENST00000364015 165 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 RN7SKP28-201ENST00000364770 305 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SSBP1Q04837 NPM1P38-201ENST00000403835 865 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP1Q04837 Z93019.1-201ENST00000416450 973 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 RHEBP2-201ENST00000450289 600 ntBASIC4.35□□□□□ -1.71
SSBP1Q04837 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
SSBP1Q04837 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms