Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.64□□□□□ -1.51
CLRN1P58418 TIMM9P2-201ENST00000419324 266 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 RPL7P53-201ENST00000421245 739 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.64□□□□□ -1.51
CLRN1P58418 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.64□□□□□ -1.51
CLRN1P58418 GAPDHP34-201ENST00000432112 823 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 RPSAP32-201ENST00000432681 526 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLRN1P58418 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.64□□□□□ -1.51
CLRN1P58418 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.64□□□□□ -1.51
CLRN1P58418 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.64□□□□□ -1.51
CLRN1P58418 AC007327.1-201ENST00000447461 264 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLRN1P58418 NPM1P13-201ENST00000452663 865 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 OSTCP1-201ENST00000455507 450 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.64□□□□□ -1.51
CLRN1P58418 AC108734.3-201ENST00000481241 1165 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 RPS26P24-201ENST00000497656 331 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 AC090058.1-201ENST00000498788 435 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLRN1P58418 AC105420.1-201ENST00000504389 582 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 XKRY-201ENST00000510392 1100 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.64□□□□□ -1.51
CLRN1P58418 OR5H4P-201ENST00000510851 923 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.64□□□□□ -1.51
CLRN1P58418 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.64□□□□□ -1.51
CLRN1P58418 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.64□□□□□ -1.51
CLRN1P58418 C1GALT1P3-201ENST00000522049 819 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLRN1P58418 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLRN1P58418 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.64□□□□□ -1.51
CLRN1P58418 DPRXP4-201ENST00000578053 568 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 AC124312.4-201ENST00000605533 310 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 AL031601.1-201ENST00000605702 394 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 AC135507.1-201ENST00000607214 561 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 AL354976.1-201ENST00000613843 387 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 AC109454.4-201ENST00000623411 649 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 AC073530.2-201ENST00000623987 261 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 AC010608.2-201ENST00000624830 470 ntBASIC5.64□□□□□ -1.51
CLRN1P58418 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLRN1P58418 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLRN1P58418 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLRN1P58418 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLRN1P58418 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.64□□□□□ -1.51
CLRN1P58418 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLRN1P58418 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.64□□□□□ -1.51
CLRN1P58418 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.64□□□□□ -1.51
CLRN1P58418 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLRN1P58418 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
CLRN1P58418 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CLRN1P58418 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
CLRN1P58418 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.63□□□□□ -1.51
CLRN1P58418 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 RN7SKP237-201ENST00000364663 301 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
CLRN1P58418 RNU6-549P-201ENST00000384433 107 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 Y_RNA.505-201ENST00000384489 102 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 MIR433-201ENST00000384837 93 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 RNU6-244P-201ENST00000391028 104 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.63□□□□□ -1.51
CLRN1P58418 RNA5SP115-201ENST00000411160 107 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 AC116036.1-201ENST00000412199 367 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.63□□□□□ -1.51
CLRN1P58418 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.63□□□□□ -1.51
CLRN1P58418 OR5W1P-201ENST00000423705 938 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CLRN1P58418 GAPDHP19-201ENST00000431768 1005 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 AL022324.2-201ENST00000434827 780 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.63□□□□□ -1.51
CLRN1P58418 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 CDC42P1-201ENST00000456658 548 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 RN7SL393P-201ENST00000463588 296 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms